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The map label for this gene is trmE [C]

Identifier: 150400784

GI number: 150400784

Start: 372838

End: 373407

Strand: Direct

Name: trmE [C]

Synonym: Maeo_0351

Alternate gene names: 150400784

Gene position: 372838-373407 (Clockwise)

Preceding gene: 150400783

Following gene: 150400785

Centisome position: 23.76

GC content: 28.07

Gene sequence:

>570_bases
ATGATAGATTTAAATGATGAAGCAGTCGATTTTAAAATAGTATTAATTGGTCCCGAAAATTCAGGTAAGTCCGCAATAAT
AAATTCCATTTTTGGAAAATATATTTCTACGGTTTCGGAAGTAGGTGGCACAACCAAAATGCCCATAAAAAAATTTTGGG
GCCAGATTAAAATAGGAAAATCCAAGAAAAATCCAAAATTTGCAAAATTATCATTTGTAGATTTAGGAGGATTATATGCG
GGTGAAAAAAAATCCCCCATAATGGTGGGCAGAATATTGGATGAAACATACAAAGAAATAGATAATGCCCATTTAATAAT
TCATGTTGTTGATGGTAAAAAGGGACTTTCAAAAAGTTTTGAAAAACTCCATCATTTACTTAAATATAGATACCAAAAAC
CAATTATAGTAGTTATATCTAAAAGTGATTTGATAGATGCCAATAATATCAATGATTTAAAAAATCATATCGAGAAACGA
TTGGAAAATAAAACCATAATTACTTCAACAATAACATACCAAGGCATAACTGAATTACTTAATACCATAATAGAATTATT
AAAAAAATAA

Upstream 100 bases:

>100_bases
TTACATAATGGTTATTATTTATTGGGAGCTCCCAATAAAAGTTTTATAATATTAATAAAAATAAAAAAATATATGGATTT
AGTTAAAATTAAGGTATAAT

Downstream 100 bases:

>100_bases
TATTAAAATAATACACATATAAATAATGCTAATATATAAATAATATTTGATAAATAGGATAAAATATAGTAAATCTGCAA
TTCGTGGCACATACTAATAT

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIDLNDEAVDFKIVLIGPENSGKSAIINSIFGKYISTVSEVGGTTKMPIKKFWGQIKIGKSKKNPKFAKLSFVDLGGLYA
GEKKSPIMVGRILDETYKEIDNAHLIIHVVDGKKGLSKSFEKLHHLLKYRYQKPIIVVISKSDLIDANNINDLKNHIEKR
LENKTIITSTITYQGITELLNTIIELLKK

Sequences:

>Translated_189_residues
MIDLNDEAVDFKIVLIGPENSGKSAIINSIFGKYISTVSEVGGTTKMPIKKFWGQIKIGKSKKNPKFAKLSFVDLGGLYA
GEKKSPIMVGRILDETYKEIDNAHLIIHVVDGKKGLSKSFEKLHHLLKYRYQKPIIVVISKSDLIDANNINDLKNHIEKR
LENKTIITSTITYQGITELLNTIIELLKK
>Mature_189_residues
MIDLNDEAVDFKIVLIGPENSGKSAIINSIFGKYISTVSEVGGTTKMPIKKFWGQIKIGKSKKNPKFAKLSFVDLGGLYA
GEKKSPIMVGRILDETYKEIDNAHLIIHVVDGKKGLSKSFEKLHHLLKYRYQKPIIVVISKSDLIDANNINDLKNHIEKR
LENKTIITSTITYQGITELLNTIIELLKK

Specific function: Exhibits A Very High Intrinsic Gtpase Hydrolysis Rate. Involved In The Biosynthesis Of The Hypermodified Nucleoside 5- Methylaminomethyl-2-Thiouridine, Which Is Found In The Wobble Position Of Some Trnas. [C]

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic; may also be associated with the inner membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002917
- InterPro:   IPR001806
- InterPro:   IPR005225 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 21223; Mature: 21223

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLNDEAVDFKIVLIGPENSGKSAIINSIFGKYISTVSEVGGTTKMPIKKFWGQIKIGK
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECC
SKKNPKFAKLSFVDLGGLYAGEKKSPIMVGRILDETYKEIDNAHLIIHVVDGKKGLSKSF
CCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
EKLHHLLKYRYQKPIIVVISKSDLIDANNINDLKNHIEKRLENKTIITSTITYQGITELL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
NTIIELLKK
HHHHHHHCC
>Mature Secondary Structure
MIDLNDEAVDFKIVLIGPENSGKSAIINSIFGKYISTVSEVGGTTKMPIKKFWGQIKIGK
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECC
SKKNPKFAKLSFVDLGGLYAGEKKSPIMVGRILDETYKEIDNAHLIIHVVDGKKGLSKSF
CCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
EKLHHLLKYRYQKPIIVVISKSDLIDANNINDLKNHIEKRLENKTIITSTITYQGITELL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
NTIIELLKK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]