| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400776
Identifier: 150400776
GI number: 150400776
Start: 363487
End: 364233
Strand: Direct
Name: 150400776
Synonym: Maeo_0343
Alternate gene names: NA
Gene position: 363487-364233 (Clockwise)
Preceding gene: 150400770
Following gene: 150400779
Centisome position: 23.16
GC content: 35.21
Gene sequence:
>747_bases ATGATACATAAAAAAATCTCAATAATGGAAACAAATATAAATTTAAAGGTAGATGATGATAAATATATAAATCTTGCTAA AAACACCATTTTAAGGGAAAGGGCAAATATTCAAAATTATATATTGGATTATCCTGAATTTTTAACGAGCTATACTCCCA TAAAGGTTAGCCCCGATGCACCAGCAATAGTAAAAACAATGGCAAAGGCGGGAGAAATTGCAGCCGTTGGACCAATGGCA TCGGTAGCAGGAACCATAAGTGAATTTATTGTAAAAAATGCCGTAGAATATGGCTGTAAAAATATAATCTCTGAAAATGG GGGGGATATTGCACTAAAAACTGAAAAATCCGTTGTAGTTGGATTATATGCAGGGAGCTCCCCACTATCATATACAATAG GATTTAAAATAAACGAAGATAAAGCCAATAATGGATATGGAGTATGCACCTCCTCAGGAACTGTTGGGCACTCCGTAAGC TTTGGAAATGCCGATGCCATAGTAGTTTTTGCAAAAAAAGCATCAATTGCAGATGCATCGGCTACAAGTATAGGTAATTT TGCTGTGGGAGCTCCTGACGATGCCATAAATAAATGCCTTGAAAAAGCCGAAGATATTGAATATATTGACGGTGTTTTTG TGGTGATGGGAGAATTTGCAGGTAAAATGGGAAAAATACCACAAATGGTTAAAACGGACGAAAAAATTGTAAAAACTTCA ATGGGAGAATATTTTGATATGATATAA
Upstream 100 bases:
>100_bases ATATATATGTATTGAATATATGAAAACCATCATACTTAAAATATTAATATATTTTAGATAGATTATAATTTACTAGTAAT AATATAGAATATATGATAAT
Downstream 100 bases:
>100_bases TTTTGAAATAACCATATGTACTATTTCCACAGTAAATATTGGAGCTCCCATTATAGTTAATCTTCAATAATTGTCCTTTA TTTGTCTTATTAGTGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MIHKKISIMETNINLKVDDDKYINLAKNTILRERANIQNYILDYPEFLTSYTPIKVSPDAPAIVKTMAKAGEIAAVGPMA SVAGTISEFIVKNAVEYGCKNIISENGGDIALKTEKSVVVGLYAGSSPLSYTIGFKINEDKANNGYGVCTSSGTVGHSVS FGNADAIVVFAKKASIADASATSIGNFAVGAPDDAINKCLEKAEDIEYIDGVFVVMGEFAGKMGKIPQMVKTDEKIVKTS MGEYFDMI
Sequences:
>Translated_248_residues MIHKKISIMETNINLKVDDDKYINLAKNTILRERANIQNYILDYPEFLTSYTPIKVSPDAPAIVKTMAKAGEIAAVGPMA SVAGTISEFIVKNAVEYGCKNIISENGGDIALKTEKSVVVGLYAGSSPLSYTIGFKINEDKANNGYGVCTSSGTVGHSVS FGNADAIVVFAKKASIADASATSIGNFAVGAPDDAINKCLEKAEDIEYIDGVFVVMGEFAGKMGKIPQMVKTDEKIVKTS MGEYFDMI >Mature_248_residues MIHKKISIMETNINLKVDDDKYINLAKNTILRERANIQNYILDYPEFLTSYTPIKVSPDAPAIVKTMAKAGEIAAVGPMA SVAGTISEFIVKNAVEYGCKNIISENGGDIALKTEKSVVVGLYAGSSPLSYTIGFKINEDKANNGYGVCTSSGTVGHSVS FGNADAIVVFAKKASIADASATSIGNFAVGAPDDAINKCLEKAEDIEYIDGVFVVMGEFAGKMGKIPQMVKTDEKIVKTS MGEYFDMI
Specific function: Unknown
COG id: COG2122
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0280 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y343_META3 (A6UTV8)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324542.1 - ProteinModelPortal: A6UTV8 - SMR: A6UTV8 - STRING: A6UTV8 - GeneID: 5326717 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0343 - eggNOG: arNOG08088 - HOGENOM: HBG458461 - OMA: ADVGPMA - ProtClustDB: PRK04334 - BioCyc: MAEO419665:MAEO_0343-MONOMER - HAMAP: MF_01079 - InterPro: IPR023156 - InterPro: IPR003374 - InterPro: IPR007183 - PIRSF: PIRSF006421
Pfam domain/function: PF02424 ApbE
EC number: NA
Molecular weight: Translated: 26491; Mature: 26491
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKKISIMETNINLKVDDDKYINLAKNTILRERANIQNYILDYPEFLTSYTPIKVSPDA CCCCEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCC PAIVKTMAKAGEIAAVGPMASVAGTISEFIVKNAVEYGCKNIISENGGDIALKTEKSVVV CHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEE GLYAGSSPLSYTIGFKINEDKANNGYGVCTSSGTVGHSVSFGNADAIVVFAKKASIADAS EEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCC ATSIGNFAVGAPDDAINKCLEKAEDIEYIDGVFVVMGEFAGKMGKIPQMVKTDEKIVKTS CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MGEYFDMI HHHHHHCC >Mature Secondary Structure MIHKKISIMETNINLKVDDDKYINLAKNTILRERANIQNYILDYPEFLTSYTPIKVSPDA CCCCEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCC PAIVKTMAKAGEIAAVGPMASVAGTISEFIVKNAVEYGCKNIISENGGDIALKTEKSVVV CHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEE GLYAGSSPLSYTIGFKINEDKANNGYGVCTSSGTVGHSVSFGNADAIVVFAKKASIADAS EEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCC ATSIGNFAVGAPDDAINKCLEKAEDIEYIDGVFVVMGEFAGKMGKIPQMVKTDEKIVKTS CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MGEYFDMI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA