| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400765
Identifier: 150400765
GI number: 150400765
Start: 351208
End: 351564
Strand: Reverse
Name: 150400765
Synonym: Maeo_0331
Alternate gene names: NA
Gene position: 351564-351208 (Counterclockwise)
Preceding gene: 150400766
Following gene: 150400764
Centisome position: 22.4
GC content: 34.73
Gene sequence:
>357_bases ATGAGTTGCACTGATGCAAAAACCATGGTAGAAGGAACTGATTTTGAAAAAAAACACACTCCAATGATTGAGTGTAAAGA TACAGTAAAGACAGGGGAAATTTTTGAGGTTAAAATTCATACCGCAGGGGTCGAACATCCAATGGATGACGGACATTTTA TTCAATTTATGGGACTTAGGATAGGAGATATTCCTTTGGCAAGAGCAGATTTGACACAATATGCTAAACCTGAAGTAGTA TTTCATATAAAAGCTCCATCAGAAGGTCATAAAGGTACTGTAATGAAATTAACCGCATATGCATATTGCAATCTTCACGG CATATGGAAATATGAAAAAGAGATAAAAATAGAATAA
Upstream 100 bases:
>100_bases ATAACGAAATTCGAATAGTTAAATATTTATTAAATATATTATACATATTCATTTGCATAATTTATTTAATATAGATTAAA AAAATAAAACAGGAGATAGC
Downstream 100 bases:
>100_bases TGAGGTCAATGGATATTCAATATTATTATAATTAAAAATATGGGGCGATAATATGACAAAATATCAATGTATGTGTGGAT GGATATATGATGAATCTGTT
Product: desulfoferrodoxin ferrous iron-binding region
Products: NA
Alternate protein names: SOR [H]
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSCTDAKTMVEGTDFEKKHTPMIECKDTVKTGEIFEVKIHTAGVEHPMDDGHFIQFMGLRIGDIPLARADLTQYAKPEVV FHIKAPSEGHKGTVMKLTAYAYCNLHGIWKYEKEIKIE
Sequences:
>Translated_118_residues MSCTDAKTMVEGTDFEKKHTPMIECKDTVKTGEIFEVKIHTAGVEHPMDDGHFIQFMGLRIGDIPLARADLTQYAKPEVV FHIKAPSEGHKGTVMKLTAYAYCNLHGIWKYEKEIKIE >Mature_117_residues SCTDAKTMVEGTDFEKKHTPMIECKDTVKTGEIFEVKIHTAGVEHPMDDGHFIQFMGLRIGDIPLARADLTQYAKPEVVF HIKAPSEGHKGTVMKLTAYAYCNLHGIWKYEKEIKIE
Specific function: Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide [H]
COG id: COG2033
COG function: function code C; Desulfoferrodoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the desulfoferrodoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002742 [H]
Pfam domain/function: PF01880 Desulfoferrodox [H]
EC number: =1.15.1.2 [H]
Molecular weight: Translated: 13369; Mature: 13237
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCTDAKTMVEGTDFEKKHTPMIECKDTVKTGEIFEVKIHTAGVEHPMDDGHFIQFMGLR CCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECEE IGDIPLARADLTQYAKPEVVFHIKAPSEGHKGTVMKLTAYAYCNLHGIWKYEKEIKIE ECCCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEEECEEEECC >Mature Secondary Structure SCTDAKTMVEGTDFEKKHTPMIECKDTVKTGEIFEVKIHTAGVEHPMDDGHFIQFMGLR CCCCCCEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECEE IGDIPLARADLTQYAKPEVVFHIKAPSEGHKGTVMKLTAYAYCNLHGIWKYEKEIKIE ECCCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]