Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is flaF [H]

Identifier: 150400699

GI number: 150400699

Start: 289349

End: 289756

Strand: Direct

Name: flaF [H]

Synonym: Maeo_0264

Alternate gene names: 150400699

Gene position: 289349-289756 (Clockwise)

Preceding gene: 150400698

Following gene: 150400700

Centisome position: 18.44

GC content: 30.15

Gene sequence:

>408_bases
ATGGGATTTAGTTCAATTGCTGGATTTTTGGTATTGATATCGACATTATTGGCATGTTCATTATATCTGTATGATAATGT
GGACTCAAGCCTGACTGAAATAAATAGTGCATATTCTGAATATATCGAACATTTGAGCGATAAATCAGATGAAAAATTAA
TAATAACTTCGGTCGTGGGTGTTGATGGTAATATATATATTAATGTGTTAAATAATGGCTCATTAACTAATGAACCATAT
AAATGGACAGCATTATACAATGGTACTCCAAAAGGAATTAGCATCGATTCAAATATAACATACCTAACTCCATTAAATAA
TGTGACCATTACAATAATAGGGACGGCCCCTGCCAGGATATGTATTGTGTCAGAATATGGAAATAAATATTATTATTATT
TAAATTAA

Upstream 100 bases:

>100_bases
CTATTTATTGAAAGAATAAATGGTAAAAAAACATCTGGTGAAACACTCGATACAATAGAGTGGGAAATAAGAAAAATAAA
AGAGGGGGTTGAACAATCAT

Downstream 100 bases:

>100_bases
TAAATATTCATGGTAAATATTTATATTTATATTTACTTATTTATTCTTAGAGTTATTTTAACTTAAAAATATAAATACCC
ATATAATTAATATATTTTAA

Product: flagellar protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPY
KWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN

Sequences:

>Translated_135_residues
MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPY
KWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN
>Mature_134_residues
GFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPYK
WTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN

Specific function: Unknown

COG id: COG3353

COG function: function code N; Putative archaeal flagellar protein F

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14888; Mature: 14757

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVG
CCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
VDGNIYINVLNNGSLTNEPYKWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARI
CCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCCEEEEEEECCCEEE
CIVSEYGNKYYYYLN
EEEEECCCEEEEEEC
>Mature Secondary Structure 
GFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVG
CHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
VDGNIYINVLNNGSLTNEPYKWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARI
CCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCCEEEEEEECCCEEE
CIVSEYGNKYYYYLN
EEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA