| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is flaF [H]
Identifier: 150400699
GI number: 150400699
Start: 289349
End: 289756
Strand: Direct
Name: flaF [H]
Synonym: Maeo_0264
Alternate gene names: 150400699
Gene position: 289349-289756 (Clockwise)
Preceding gene: 150400698
Following gene: 150400700
Centisome position: 18.44
GC content: 30.15
Gene sequence:
>408_bases ATGGGATTTAGTTCAATTGCTGGATTTTTGGTATTGATATCGACATTATTGGCATGTTCATTATATCTGTATGATAATGT GGACTCAAGCCTGACTGAAATAAATAGTGCATATTCTGAATATATCGAACATTTGAGCGATAAATCAGATGAAAAATTAA TAATAACTTCGGTCGTGGGTGTTGATGGTAATATATATATTAATGTGTTAAATAATGGCTCATTAACTAATGAACCATAT AAATGGACAGCATTATACAATGGTACTCCAAAAGGAATTAGCATCGATTCAAATATAACATACCTAACTCCATTAAATAA TGTGACCATTACAATAATAGGGACGGCCCCTGCCAGGATATGTATTGTGTCAGAATATGGAAATAAATATTATTATTATT TAAATTAA
Upstream 100 bases:
>100_bases CTATTTATTGAAAGAATAAATGGTAAAAAAACATCTGGTGAAACACTCGATACAATAGAGTGGGAAATAAGAAAAATAAA AGAGGGGGTTGAACAATCAT
Downstream 100 bases:
>100_bases TAAATATTCATGGTAAATATTTATATTTATATTTACTTATTTATTCTTAGAGTTATTTTAACTTAAAAATATAAATACCC ATATAATTAATATATTTTAA
Product: flagellar protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPY KWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN
Sequences:
>Translated_135_residues MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPY KWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN >Mature_134_residues GFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVGVDGNIYINVLNNGSLTNEPYK WTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARICIVSEYGNKYYYYLN
Specific function: Unknown
COG id: COG3353
COG function: function code N; Putative archaeal flagellar protein F
Gene ontology:
Cell location: Archaeal flagellum (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii flaF [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14888; Mature: 14757
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVG CCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC VDGNIYINVLNNGSLTNEPYKWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARI CCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCCEEEEEEECCCEEE CIVSEYGNKYYYYLN EEEEECCCEEEEEEC >Mature Secondary Structure GFSSIAGFLVLISTLLACSLYLYDNVDSSLTEINSAYSEYIEHLSDKSDEKLIITSVVG CHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC VDGNIYINVLNNGSLTNEPYKWTALYNGTPKGISIDSNITYLTPLNNVTITIIGTAPARI CCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEECCCEEEEEEECCCEEE CIVSEYGNKYYYYLN EEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA