Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is uspF [C]

Identifier: 150400688

GI number: 150400688

Start: 279368

End: 279814

Strand: Reverse

Name: uspF [C]

Synonym: Maeo_0252

Alternate gene names: 150400688

Gene position: 279814-279368 (Counterclockwise)

Preceding gene: 150400690

Following gene: 150400687

Centisome position: 17.83

GC content: 35.35

Gene sequence:

>447_bases
ATGCCATACGAAAAGATATTAGTTCCAACAGATAGTTCTGCTGTTTCATTAGAAGCCGCAAATCAGGCTCTTGAAATAGC
AAAGGCAATGAATTCAAAGGTTCATGCAGTATATGTTGTGGATATTGTTCCATTTGTAGGACTTCCTACGGAAGGACTTT
GGGAGAGTATGAAAGAGATATTGGAAGAAGAAGGAATGGAAGCCTTACAAAAAATAGAAAAAATGGCCAAGGAAATGGGC
GTAAATATGACTTCCAAAGTTCTTGAAGGTAGTCCATCAAATGAAATAGTAAAATATGCCGAAAACGAAAAAATAGATTT
AATTGTCATAGGGACCACTGGAAAATCTGGTTTAGATAAAATATTACTTGGAAGTGTTGCCGAAAAAGTTAGTAAAAAGG
CACATTGTCCGGTGCTTTTGGTAAAAAAGACAGATAAAGAAGAATAA

Upstream 100 bases:

>100_bases
TTAATAGAAATTAATAGAATGTTCGCCAATATATGTATTCGTTAGGGTTAATACAGGAGCTCCCGAACGAAATAATAAAA
GGAAAAAATAGGTGTGATGT

Downstream 100 bases:

>100_bases
ATTATTATTTAATAACTATTTAAATATTATTTTTAATTATATATTTTATCAAGACCTACTCCCACGAATATAGTCAATCT
TCGGTCTTTTTCACTAAACC

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPYEKILVPTDSSAVSLEAANQALEIAKAMNSKVHAVYVVDIVPFVGLPTEGLWESMKEILEEEGMEALQKIEKMAKEMG
VNMTSKVLEGSPSNEIVKYAENEKIDLIVIGTTGKSGLDKILLGSVAEKVSKKAHCPVLLVKKTDKEE

Sequences:

>Translated_148_residues
MPYEKILVPTDSSAVSLEAANQALEIAKAMNSKVHAVYVVDIVPFVGLPTEGLWESMKEILEEEGMEALQKIEKMAKEMG
VNMTSKVLEGSPSNEIVKYAENEKIDLIVIGTTGKSGLDKILLGSVAEKVSKKAHCPVLLVKKTDKEE
>Mature_147_residues
PYEKILVPTDSSAVSLEAANQALEIAKAMNSKVHAVYVVDIVPFVGLPTEGLWESMKEILEEEGMEALQKIEKMAKEMGV
NMTSKVLEGSPSNEIVKYAENEKIDLIVIGTTGKSGLDKILLGSVAEKVSKKAHCPVLLVKKTDKEE

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16115; Mature: 15984

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYEKILVPTDSSAVSLEAANQALEIAKAMNSKVHAVYVVDIVPFVGLPTEGLWESMKEI
CCCCCEEEECCCCEEEHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCHHHHHHHHHH
LEEEGMEALQKIEKMAKEMGVNMTSKVLEGSPSNEIVKYAENEKIDLIVIGTTGKSGLDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHH
ILLGSVAEKVSKKAHCPVLLVKKTDKEE
HHHHHHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure 
PYEKILVPTDSSAVSLEAANQALEIAKAMNSKVHAVYVVDIVPFVGLPTEGLWESMKEI
CCCCEEEECCCCEEEHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCHHHHHHHHHH
LEEEGMEALQKIEKMAKEMGVNMTSKVLEGSPSNEIVKYAENEKIDLIVIGTTGKSGLDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHH
ILLGSVAEKVSKKAHCPVLLVKKTDKEE
HHHHHHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]