| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400661
Identifier: 150400661
GI number: 150400661
Start: 243330
End: 244118
Strand: Direct
Name: 150400661
Synonym: Maeo_0223
Alternate gene names: NA
Gene position: 243330-244118 (Clockwise)
Preceding gene: 150400658
Following gene: 150400662
Centisome position: 15.5
GC content: 32.32
Gene sequence:
>789_bases GTGAAAAAAAGAAATATTACGGAATTTCAAATATTGTCCGAAATTGTAAGAAAACAACCACACATAAAACAGAAAGAAAT TGCAGATGTATTGGGCATAACGGTTCAAGGTGTATCAGAGCATATTAGAAATTTGCTAAAAAAAGGATTAATAACATCGA GAGGGCGTGGAGAGTATGTTCTCACAGCGGACGGAATGAAGGCATTAAAAGTATGGATTTCAGATTTTAAAAGTTATTTA AACCATGTAAATCAAGATATATATAGGTATAAAGATGTCTGGCCCGCAATTGCTAACGAGGATTTAAAAGAAGGGGATGA AGTTTATCTATATATGAATAAAGGGCATTTATATGCATCAAAAGAAGTTAAGTCGAAATCCACCGCAAAAGTTAGTGAAG GGGGATATGCGGGAGAAGATATAGCAATAGAAAATATAAATGGAATAATTGAAATAAAAAAAGGAAAAGTTATAATATTA AAGATACCTCCAAAAGTTAAAGGAGGTTCTAAAAATGTAGATTATGAAGTTATACAAAACATATTAGATGCCAATAGGGA CTCAGTTGTTGCTACTATGGGGACTATCTCCCATGTTGTATCTAAAAAATTAAATATTAAGCCAGAAATAAGATTTGCAG TATTGGAGGGGATAGTGGGGGCATGCGATAGAGGTTGTGATGTAGTATGTCTAATTACAGGTAAAATGACTGAAAAAGTG GTAAAAACATTGGATAAACATAAAATAAGTTATTCTGTAATTGACTGCGCAAAAGATGTCGATAATTAA
Upstream 100 bases:
>100_bases ACATATCTTTAATTAGTGGGTATTTTAATTATTTTATTATATATTATTATACCTAGTTACTATTATTAATATTACTATTA TTCATTTATTGGTGATTAGT
Downstream 100 bases:
>100_bases AATTGAATATCAAAAAATCAAATGATAAATTATTAATATGAGTATTATAAATTATTAATAGAAGTATAAAATACCAATAT AGCATATTAAATGAAAAATA
Product: helix-turn-helix type 11 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKKRNITEFQILSEIVRKQPHIKQKEIADVLGITVQGVSEHIRNLLKKGLITSRGRGEYVLTADGMKALKVWISDFKSYL NHVNQDIYRYKDVWPAIANEDLKEGDEVYLYMNKGHLYASKEVKSKSTAKVSEGGYAGEDIAIENINGIIEIKKGKVIIL KIPPKVKGGSKNVDYEVIQNILDANRDSVVATMGTISHVVSKKLNIKPEIRFAVLEGIVGACDRGCDVVCLITGKMTEKV VKTLDKHKISYSVIDCAKDVDN
Sequences:
>Translated_262_residues MKKRNITEFQILSEIVRKQPHIKQKEIADVLGITVQGVSEHIRNLLKKGLITSRGRGEYVLTADGMKALKVWISDFKSYL NHVNQDIYRYKDVWPAIANEDLKEGDEVYLYMNKGHLYASKEVKSKSTAKVSEGGYAGEDIAIENINGIIEIKKGKVIIL KIPPKVKGGSKNVDYEVIQNILDANRDSVVATMGTISHVVSKKLNIKPEIRFAVLEGIVGACDRGCDVVCLITGKMTEKV VKTLDKHKISYSVIDCAKDVDN >Mature_262_residues MKKRNITEFQILSEIVRKQPHIKQKEIADVLGITVQGVSEHIRNLLKKGLITSRGRGEYVLTADGMKALKVWISDFKSYL NHVNQDIYRYKDVWPAIANEDLKEGDEVYLYMNKGHLYASKEVKSKSTAKVSEGGYAGEDIAIENINGIIEIKKGKVIIL KIPPKVKGGSKNVDYEVIQNILDANRDSVVATMGTISHVVSKKLNIKPEIRFAVLEGIVGACDRGCDVVCLITGKMTEKV VKTLDKHKISYSVIDCAKDVDN
Specific function: Unknown
COG id: COG1497
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001808 - InterPro: IPR000835 - InterPro: IPR012015 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 29215; Mature: 29215
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRNITEFQILSEIVRKQPHIKQKEIADVLGITVQGVSEHIRNLLKKGLITSRGRGEYV CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LTADGMKALKVWISDFKSYLNHVNQDIYRYKDVWPAIANEDLKEGDEVYLYMNKGHLYAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEC KEVKSKSTAKVSEGGYAGEDIAIENINGIIEIKKGKVIILKIPPKVKGGSKNVDYEVIQN HHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHH ILDANRDSVVATMGTISHVVSKKLNIKPEIRFAVLEGIVGACDRGCDVVCLITGKMTEKV HHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH VKTLDKHKISYSVIDCAKDVDN HHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MKKRNITEFQILSEIVRKQPHIKQKEIADVLGITVQGVSEHIRNLLKKGLITSRGRGEYV CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LTADGMKALKVWISDFKSYLNHVNQDIYRYKDVWPAIANEDLKEGDEVYLYMNKGHLYAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEC KEVKSKSTAKVSEGGYAGEDIAIENINGIIEIKKGKVIILKIPPKVKGGSKNVDYEVIQN HHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHH ILDANRDSVVATMGTISHVVSKKLNIKPEIRFAVLEGIVGACDRGCDVVCLITGKMTEKV HHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH VKTLDKHKISYSVIDCAKDVDN HHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]