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The map label for this gene is lysS [H]

Identifier: 150400653

GI number: 150400653

Start: 232374

End: 234011

Strand: Direct

Name: lysS [H]

Synonym: Maeo_0215

Alternate gene names: 150400653

Gene position: 232374-234011 (Clockwise)

Preceding gene: 150400650

Following gene: 150400654

Centisome position: 14.81

GC content: 31.75

Gene sequence:

>1638_bases
TTGCACTGGGCTGATGCAACTGCAAAAAAAATTATAAAAAAAAGACAAAAACAAAATCCTAAAAAGTATCTCATATCTAG
TGGTATAACTCCATCGGGACATATCCATGTAGGAAATGCAAGAGAGACCCTTACAGCAGATGGAATATATAAGGGGCTGT
TAAAAGAAGGCGTAGAAGCTGAATTAATATTTATAGCCGATAACTATGACCCACTTAGGAAGGTTTATCCATTTTTACCA
CCAGAATATGAAAAATTCGTTGGTATGCCATTAAGTGAAATACCCTGTCCAGAAGGTTGTTGTGATAGCTATGCGGACCA
TTTTTTAAATCCATTTATAAATAGTTTGGACGATTTAGGAATAAATTTAACAGTTTATAAGGCTGATGAAAATTATAAAA
ATGGATTATACAATGATGCCATAATAACGGCACTAAATGATAGGGATAAAATTAAAGGAGTATTGGACAAATACAGAAGA
GAACCACTTCCAGAAGATTGGTATCCATTAAATATTATCTGTGAAAAATGTGGTAAATTAAGTACTACAAAGGTAATTAA
TTACAACAGTGAGGAGAGCACCGTAGATTATGAATGCCAATGCGGACATAAAAACACAGTTAAACCATTTGATGGTAGGG
GGAAACTACCATGGAGAGTAGATTGGCCTGCTAGATGGAAAATATTTGATGTAGTTGCCGAACCAATGGGGAAAGACCAT
GGGGCATCAGGTGGTTCTTATGATACTGGAATAAAAATATCTCAAATGGTGTATAGATATGGAGCTCCTGAAAAAATAAT
ATATGAATGGATTCAATTAAAAGTAGGGGATAAAGCCCTTCCAATGTCTTCCTCGTCGGGCGTCGTATTTGCTGTAAAGG
ATTGGGTAAAAATCTGCCACCCCGAAGTTTTAAGATTTTTATTACTTAGAAGCAAACCTTCAAAGCATATTGATTTTAAT
TTAAAAACTCTTCCAAATATTGTAGATGATTATGATGAACTTGAAACAAAATATTTTGGGTTAAAAGAAAAAGAAGGAAA
TGGGGAAGAATTAAACGAAAACGAAAAAGATAAAATAAGATTATATGAACTATGCACACCAAAAATACCAAATAAACTTC
CTTTAAATATACCTTATAAATTCTGTGTTATAGTATCCCAAATAGCATATAATCCAGAAACAGAAACTATCGACATGAAT
AAGGTAATCGATATTTTAAAAAGAAATAACTACGAACAGGCTGAATTATTAAAATACGAAGAAAATAAAGAAGACTACAA
TAAATTGAAAACACGATTATATTGTGCAATGAATTGGGCAATAGAATATGGTGAAAAATTAATATTAATCGACTCAAACA
CGGCAAAAGAAAATTACAATGAGTTAAGCCAAAAGCAAAAAGAATGGATAAAGCTATTTAGAGAAAACTTAAAAAACATG
GGAAATAATGAAGAAAGCTATAATGCTTCATCAATACATGAATTAATATATGATAGTGCAAAAGAGATTGATTTAGAACC
AAAAGAAGCATTTTCAGCCTCATATAAAATATTGCTTGGTAAAAACTACGGCCCTAAATTGGGTAGTTTTTTATCATCTC
TTGATAAAGATTTTGTTATTGAAAGATATGCCCTATAA

Upstream 100 bases:

>100_bases
TGTGTTTAATATAATTTTAATTAAAGATGTTTTTATATTATATATAATTTTCGAAAAACGAAATAAAAAAAATAAAAATA
AACTAAAAAAGGTGATTATT

Downstream 100 bases:

>100_bases
AAATTATAGATAAAAAAATACATTCTTTTTTATATTTTTATATTCCGTGGTAAATTGATGGACACAATGCATATTGAAGC
TCACGAGGAGATAATAGCTA

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MHWADATAKKIIKKRQKQNPKKYLISSGITPSGHIHVGNARETLTADGIYKGLLKEGVEAELIFIADNYDPLRKVYPFLP
PEYEKFVGMPLSEIPCPEGCCDSYADHFLNPFINSLDDLGINLTVYKADENYKNGLYNDAIITALNDRDKIKGVLDKYRR
EPLPEDWYPLNIICEKCGKLSTTKVINYNSEESTVDYECQCGHKNTVKPFDGRGKLPWRVDWPARWKIFDVVAEPMGKDH
GASGGSYDTGIKISQMVYRYGAPEKIIYEWIQLKVGDKALPMSSSSGVVFAVKDWVKICHPEVLRFLLLRSKPSKHIDFN
LKTLPNIVDDYDELETKYFGLKEKEGNGEELNENEKDKIRLYELCTPKIPNKLPLNIPYKFCVIVSQIAYNPETETIDMN
KVIDILKRNNYEQAELLKYEENKEDYNKLKTRLYCAMNWAIEYGEKLILIDSNTAKENYNELSQKQKEWIKLFRENLKNM
GNNEESYNASSIHELIYDSAKEIDLEPKEAFSASYKILLGKNYGPKLGSFLSSLDKDFVIERYAL

Sequences:

>Translated_545_residues
MHWADATAKKIIKKRQKQNPKKYLISSGITPSGHIHVGNARETLTADGIYKGLLKEGVEAELIFIADNYDPLRKVYPFLP
PEYEKFVGMPLSEIPCPEGCCDSYADHFLNPFINSLDDLGINLTVYKADENYKNGLYNDAIITALNDRDKIKGVLDKYRR
EPLPEDWYPLNIICEKCGKLSTTKVINYNSEESTVDYECQCGHKNTVKPFDGRGKLPWRVDWPARWKIFDVVAEPMGKDH
GASGGSYDTGIKISQMVYRYGAPEKIIYEWIQLKVGDKALPMSSSSGVVFAVKDWVKICHPEVLRFLLLRSKPSKHIDFN
LKTLPNIVDDYDELETKYFGLKEKEGNGEELNENEKDKIRLYELCTPKIPNKLPLNIPYKFCVIVSQIAYNPETETIDMN
KVIDILKRNNYEQAELLKYEENKEDYNKLKTRLYCAMNWAIEYGEKLILIDSNTAKENYNELSQKQKEWIKLFRENLKNM
GNNEESYNASSIHELIYDSAKEIDLEPKEAFSASYKILLGKNYGPKLGSFLSSLDKDFVIERYAL
>Mature_545_residues
MHWADATAKKIIKKRQKQNPKKYLISSGITPSGHIHVGNARETLTADGIYKGLLKEGVEAELIFIADNYDPLRKVYPFLP
PEYEKFVGMPLSEIPCPEGCCDSYADHFLNPFINSLDDLGINLTVYKADENYKNGLYNDAIITALNDRDKIKGVLDKYRR
EPLPEDWYPLNIICEKCGKLSTTKVINYNSEESTVDYECQCGHKNTVKPFDGRGKLPWRVDWPARWKIFDVVAEPMGKDH
GASGGSYDTGIKISQMVYRYGAPEKIIYEWIQLKVGDKALPMSSSSGVVFAVKDWVKICHPEVLRFLLLRSKPSKHIDFN
LKTLPNIVDDYDELETKYFGLKEKEGNGEELNENEKDKIRLYELCTPKIPNKLPLNIPYKFCVIVSQIAYNPETETIDMN
KVIDILKRNNYEQAELLKYEENKEDYNKLKTRLYCAMNWAIEYGEKLILIDSNTAKENYNELSQKQKEWIKLFRENLKNM
GNNEESYNASSIHELIYDSAKEIDLEPKEAFSASYKILLGKNYGPKLGSFLSSLDKDFVIERYAL

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 62736; Mature: 62736

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWADATAKKIIKKRQKQNPKKYLISSGITPSGHIHVGNARETLTADGIYKGLLKEGVEA
CCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE
ELIFIADNYDPLRKVYPFLPPEYEKFVGMPLSEIPCPEGCCDSYADHFLNPFINSLDDLG
EEEEEECCCCHHHHHCCCCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
INLTVYKADENYKNGLYNDAIITALNDRDKIKGVLDKYRREPLPEDWYPLNIICEKCGKL
CEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
STTKVINYNSEESTVDYECQCGHKNTVKPFDGRGKLPWRVDWPARWKIFDVVAEPMGKDH
CCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCC
GASGGSYDTGIKISQMVYRYGAPEKIIYEWIQLKVGDKALPMSSSSGVVFAVKDWVKICH
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHHHHC
PEVLRFLLLRSKPSKHIDFNLKTLPNIVDDYDELETKYFGLKEKEGNGEELNENEKDKIR
HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEE
LYELCTPKIPNKLPLNIPYKFCVIVSQIAYNPETETIDMNKVIDILKRNNYEQAELLKYE
EEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCHHHHHHHH
ENKEDYNKLKTRLYCAMNWAIEYGEKLILIDSNTAKENYNELSQKQKEWIKLFRENLKNM
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GNNEESYNASSIHELIYDSAKEIDLEPKEAFSASYKILLGKNYGPKLGSFLSSLDKDFVI
CCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHH
ERYAL
HHHCC
>Mature Secondary Structure
MHWADATAKKIIKKRQKQNPKKYLISSGITPSGHIHVGNARETLTADGIYKGLLKEGVEA
CCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE
ELIFIADNYDPLRKVYPFLPPEYEKFVGMPLSEIPCPEGCCDSYADHFLNPFINSLDDLG
EEEEEECCCCHHHHHCCCCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
INLTVYKADENYKNGLYNDAIITALNDRDKIKGVLDKYRREPLPEDWYPLNIICEKCGKL
CEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
STTKVINYNSEESTVDYECQCGHKNTVKPFDGRGKLPWRVDWPARWKIFDVVAEPMGKDH
CCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCC
GASGGSYDTGIKISQMVYRYGAPEKIIYEWIQLKVGDKALPMSSSSGVVFAVKDWVKICH
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHHHHC
PEVLRFLLLRSKPSKHIDFNLKTLPNIVDDYDELETKYFGLKEKEGNGEELNENEKDKIR
HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEE
LYELCTPKIPNKLPLNIPYKFCVIVSQIAYNPETETIDMNKVIDILKRNNYEQAELLKYE
EEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCHHHHHHHH
ENKEDYNKLKTRLYCAMNWAIEYGEKLILIDSNTAKENYNELSQKQKEWIKLFRENLKNM
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GNNEESYNASSIHELIYDSAKEIDLEPKEAFSASYKILLGKNYGPKLGSFLSSLDKDFVI
CCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHH
ERYAL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353192; 11121028 [H]