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The map label for this gene is rpoL [H]

Identifier: 150400628

GI number: 150400628

Start: 206585

End: 206872

Strand: Reverse

Name: rpoL [H]

Synonym: Maeo_0190

Alternate gene names: 150400628

Gene position: 206872-206585 (Counterclockwise)

Preceding gene: 150400629

Following gene: 150400627

Centisome position: 13.18

GC content: 27.08

Gene sequence:

>288_bases
ATGAATTATATAAAAATATTGAATAAAACAGAAAATTACATTGAAGTAGAATTAATACATGATGACCATTCATTAAGCAA
TCTTTTAAAAGATATGTTGTTGGATAAAAAAGATAAGGTAGTTATGGCATCATATGCCTTAGAACATCCTGTTTTAGACC
CTGAAACTGATTTGCATATTTCCAACCCAATATTGATATTAAAAACTACGGAAGGAGTTAATGCCGAAGAAGTATTAAAG
GAAGCCTTAAAAGAAATTATAGATTTATGCAATAATGTGATGAATTAA

Upstream 100 bases:

>100_bases
GACGGAAATAAAAAAAGAATATATAATGTGGATATAATTAATGAAATTAGAAACGAAATAATTAAACTAAAAAACTAATA
TATATGTAGAAGGTGATAAA

Downstream 100 bases:

>100_bases
TTATATATTGATATTATTTGATTTTTCGGAGCTCCCTGTGACGCTTTCAAGAACCACATGAAAATAATAATAATAATAAA
AATAATATTCCATCCATTAC

Product: RNA polymerase dimerisation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNYIKILNKTENYIEVELIHDDHSLSNLLKDMLLDKKDKVVMASYALEHPVLDPETDLHISNPILILKTTEGVNAEEVLK
EALKEIIDLCNNVMN

Sequences:

>Translated_95_residues
MNYIKILNKTENYIEVELIHDDHSLSNLLKDMLLDKKDKVVMASYALEHPVLDPETDLHISNPILILKTTEGVNAEEVLK
EALKEIIDLCNNVMN
>Mature_95_residues
MNYIKILNKTENYIEVELIHDDHSLSNLLKDMLLDKKDKVVMASYALEHPVLDPETDLHISNPILILKTTEGVNAEEVLK
EALKEIIDLCNNVMN

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG1761

COG function: function code K; DNA-directed RNA polymerase, subunit L

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009025
- InterPro:   IPR008193
- InterPro:   IPR022905 [H]

Pfam domain/function: NA

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 10872; Mature: 10872

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIKILNKTENYIEVELIHDDHSLSNLLKDMLLDKKDKVVMASYALEHPVLDPETDLHI
CCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCEEE
SNPILILKTTEGVNAEEVLKEALKEIIDLCNNVMN
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYIKILNKTENYIEVELIHDDHSLSNLLKDMLLDKKDKVVMASYALEHPVLDPETDLHI
CCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCEEE
SNPILILKTTEGVNAEEVLKEALKEIIDLCNNVMN
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA