Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400556

Identifier: 150400556

GI number: 150400556

Start: 130064

End: 131428

Strand: Direct

Name: 150400556

Synonym: Maeo_0118

Alternate gene names: NA

Gene position: 130064-131428 (Clockwise)

Preceding gene: 150400550

Following gene: 150400557

Centisome position: 8.29

GC content: 31.65

Gene sequence:

>1365_bases
ATGTCGAAAAATATAAATATAACATCATTAGTATTACTAAGTATGGTATCCTTCATACTATGCATAGTTCCAGTATATGC
TGATGGAGATTATAACCATAGATTAGGAGATGTAAATGCAGATGGTTCAATAAATATTATAGATGTTGTATATTTATTCA
AAAATAGAAATCTCGATTATGAAGATGGAGATATAAATGCAGATAATTCAATAAATATTATAGATGTTGTATATTTATTC
AAACATTATGACCAAATGAGAGAACCAATAAAATATGCAGAAAATATTAAATTAAAATATTATAATGAAAATGGAAATGA
AGTAAATCCATACAATGGAGAATCATGGAGTTATAAAATATTTGAAGATGCAACGGGACAGAAATTTCTTTTGAAAAATG
AATCCCAGCCAGTTCCAACATGGGCTGATGGAAAATATGATAAAATATTAACCGTTCCATTAACAAGCGTAGTTACAATG
AGTTCCACACATATAGCATTAATGGAGCCATTAAATGACGATGGTTCGGTTATTGGTTCAGTTAAGGGTGTTATGTGGGG
CGGAAGCTACACTTGGTATTTCGATAATATTAAACAGGGACTTGATAATGGCTCAATACAAGATGTGGGTTCAAGTTATT
CTCCAAATTGGGAAAATATCACAGCATTAAATCCGCAGGCTGTAATTGTATATCCAGGATATAGTGGAGATGCAATAATT
GAAAAATGTAAAAGTTTAAATATAACATATATTGCAAATTCAGAATATTTGGAAGGCTCATACCTTGCAAGATGTGAATG
GGTTAAATCATTCGCCGCATTTTACAATAAAGAGGAAGAAGCAAAAAAATATTTTACAAAAATAGATAAAAGAGCTTTAA
ATGTGAATAGAAAAACCTATAACAGTGATTATACGGTTTTAGTAGCATGGGGTAAAAATTACCCAAGTTATGGGGGAACA
TATGTTCCAAAAGCACAGGCATATGTTACCAAAGGTATAATTGATAATTGTCATGCCGATTACATATTTAAAGACATTCC
CGGAACGGGAAGTTCAAAAATAGATTATGAAACATTTGCAGAACGGGCAAAAAATGCTGATATATGGGTTGTGCCATCAA
ATACAAATTGGCTGTCAAGCTTCAAAACTGACCATCCCGGATACACCACATTTGAATCTACTAAAAATAACAGGGTATTC
TGTATAAGTGAAGATTATTACCAATTAGGACTTATGAATACCGATGAATTATTAATGGATTTGGGAACAATTATACACCC
AGAAGCATTCAAAGGAAGAACTACCCATTATTTCCTTAGTTATAATACAGATACAGGAGATGCTACTCCTTACACTGCAA
ATTAA

Upstream 100 bases:

>100_bases
CTTATATATATTATATTCACTTCATGTTATTCAAGTAATCTACATTATAATTAACTTAAAGTTAAATATCATACCATATA
AAGTTTTTGGGTGAATACTT

Downstream 100 bases:

>100_bases
AAATTAACCTTACATACTCTTTGTATAATATATATGTAGATTACTTGAAAATAAAACCTTATTATATATTATTAATTTTT
TTATTTTTACTTATTTTAGG

Product: ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSKNINITSLVLLSMVSFILCIVPVYADGDYNHRLGDVNADGSINIIDVVYLFKNRNLDYEDGDINADNSINIIDVVYLF
KHYDQMREPIKYAENIKLKYYNENGNEVNPYNGESWSYKIFEDATGQKFLLKNESQPVPTWADGKYDKILTVPLTSVVTM
SSTHIALMEPLNDDGSVIGSVKGVMWGGSYTWYFDNIKQGLDNGSIQDVGSSYSPNWENITALNPQAVIVYPGYSGDAII
EKCKSLNITYIANSEYLEGSYLARCEWVKSFAAFYNKEEEAKKYFTKIDKRALNVNRKTYNSDYTVLVAWGKNYPSYGGT
YVPKAQAYVTKGIIDNCHADYIFKDIPGTGSSKIDYETFAERAKNADIWVVPSNTNWLSSFKTDHPGYTTFESTKNNRVF
CISEDYYQLGLMNTDELLMDLGTIIHPEAFKGRTTHYFLSYNTDTGDATPYTAN

Sequences:

>Translated_454_residues
MSKNINITSLVLLSMVSFILCIVPVYADGDYNHRLGDVNADGSINIIDVVYLFKNRNLDYEDGDINADNSINIIDVVYLF
KHYDQMREPIKYAENIKLKYYNENGNEVNPYNGESWSYKIFEDATGQKFLLKNESQPVPTWADGKYDKILTVPLTSVVTM
SSTHIALMEPLNDDGSVIGSVKGVMWGGSYTWYFDNIKQGLDNGSIQDVGSSYSPNWENITALNPQAVIVYPGYSGDAII
EKCKSLNITYIANSEYLEGSYLARCEWVKSFAAFYNKEEEAKKYFTKIDKRALNVNRKTYNSDYTVLVAWGKNYPSYGGT
YVPKAQAYVTKGIIDNCHADYIFKDIPGTGSSKIDYETFAERAKNADIWVVPSNTNWLSSFKTDHPGYTTFESTKNNRVF
CISEDYYQLGLMNTDELLMDLGTIIHPEAFKGRTTHYFLSYNTDTGDATPYTAN
>Mature_453_residues
SKNINITSLVLLSMVSFILCIVPVYADGDYNHRLGDVNADGSINIIDVVYLFKNRNLDYEDGDINADNSINIIDVVYLFK
HYDQMREPIKYAENIKLKYYNENGNEVNPYNGESWSYKIFEDATGQKFLLKNESQPVPTWADGKYDKILTVPLTSVVTMS
STHIALMEPLNDDGSVIGSVKGVMWGGSYTWYFDNIKQGLDNGSIQDVGSSYSPNWENITALNPQAVIVYPGYSGDAIIE
KCKSLNITYIANSEYLEGSYLARCEWVKSFAAFYNKEEEAKKYFTKIDKRALNVNRKTYNSDYTVLVAWGKNYPSYGGTY
VPKAQAYVTKGIIDNCHADYIFKDIPGTGSSKIDYETFAERAKNADIWVVPSNTNWLSSFKTDHPGYTTFESTKNNRVFC
ISEDYYQLGLMNTDELLMDLGTIIHPEAFKGRTTHYFLSYNTDTGDATPYTAN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 51392; Mature: 51261

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00018 EF_HAND_1 ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNINITSLVLLSMVSFILCIVPVYADGDYNHRLGDVNADGSINIIDVVYLFKNRNLDY
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
EDGDINADNSINIIDVVYLFKHYDQMREPIKYAENIKLKYYNENGNEVNPYNGESWSYKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEE
FEDATGQKFLLKNESQPVPTWADGKYDKILTVPLTSVVTMSSTHIALMEPLNDDGSVIGS
EECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCCEEEE
VKGVMWGGSYTWYFDNIKQGLDNGSIQDVGSSYSPNWENITALNPQAVIVYPGYSGDAII
EEEEEECCEEEEEEHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCEEEEECCCCCHHHH
EKCKSLNITYIANSEYLEGSYLARCEWVKSFAAFYNKEEEAKKYFTKIDKRALNVNRKTY
HHHHCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
NSDYTVLVAWGKNYPSYGGTYVPKAQAYVTKGIIDNCHADYIFKDIPGTGSSKIDYETFA
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH
ERAKNADIWVVPSNTNWLSSFKTDHPGYTTFESTKNNRVFCISEDYYQLGLMNTDELLMD
HHHCCCCEEEEECCCCHHHHCCCCCCCCCEEECCCCCEEEEEECCCEEECCCCHHHHHHH
LGTIIHPEAFKGRTTHYFLSYNTDTGDATPYTAN
HHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SKNINITSLVLLSMVSFILCIVPVYADGDYNHRLGDVNADGSINIIDVVYLFKNRNLDY
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
EDGDINADNSINIIDVVYLFKHYDQMREPIKYAENIKLKYYNENGNEVNPYNGESWSYKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEE
FEDATGQKFLLKNESQPVPTWADGKYDKILTVPLTSVVTMSSTHIALMEPLNDDGSVIGS
EECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCCEEEE
VKGVMWGGSYTWYFDNIKQGLDNGSIQDVGSSYSPNWENITALNPQAVIVYPGYSGDAII
EEEEEECCEEEEEEHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCEEEEECCCCCHHHH
EKCKSLNITYIANSEYLEGSYLARCEWVKSFAAFYNKEEEAKKYFTKIDKRALNVNRKTY
HHHHCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
NSDYTVLVAWGKNYPSYGGTYVPKAQAYVTKGIIDNCHADYIFKDIPGTGSSKIDYETFA
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH
ERAKNADIWVVPSNTNWLSSFKTDHPGYTTFESTKNNRVFCISEDYYQLGLMNTDELLMD
HHHCCCCEEEEECCCCHHHHCCCCCCCCCEEECCCCCEEEEEECCCEEECCCCHHHHHHH
LGTIIHPEAFKGRTTHYFLSYNTDTGDATPYTAN
HHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]