Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is macB2 [H]

Identifier: 150400413

GI number: 150400413

Start: 1695822

End: 1697060

Strand: Reverse

Name: macB2 [H]

Synonym: Mevan_1676

Alternate gene names: 150400413

Gene position: 1697060-1695822 (Counterclockwise)

Preceding gene: 150400414

Following gene: 150400412

Centisome position: 98.66

GC content: 33.41

Gene sequence:

>1239_bases
ATGAAACCCTTAAAATTATTTAAACTGGCAGCTAAAATGGTAAAATCAAGTAAATTACGTAGCTGGATTACCATTTTAGG
CATAGTAATAGGAATTGCATCGGTAATTGCAATAATCAGTGCTGGAGACTTTTTATCAGAATCTGTGAGTTCAAAGTTAG
ATGGTATGGTAAGTAAAGAAATTACTCTCACAGCTTCACAAAATAATAAAGATAAAACGTCCGAATTAACAAAAAGAGAT
GTAATTATTCTTAAAGGAATATCGGATATTGAATACGTTGATATACGAGTATCTACGAGAAATGAAATACGATTTGCAGG
AGGGCATGAAACTGCAAACATTATTGGAGTAGACCAAAATGTCTGGCCAGTAATGTCTGAAGAAGAACTATCATCAGGTA
GGCTTTTACAGTCGGGTGACAGAAATTCAGTTGTTATATCCTATTATACTGCTAAAAACGCATTTAATCGTGAAATTGGA
ATAAATCAGATGGTTATTATTGGAAATAAGCAGTTTAAAGTCGTTGGAATCCTAAAAGAAGATGAAACTCAGGGTTTTGG
ACGTATGGGGGGAGCTAACTCAAATATAATATATATGCCCTATGAAGCCGTTTACACATTGGAAAGCGATAAAGATGCCA
CGTATTCAATTAGCGAAAAAAAGAGTGGAGTTTACGATTCTATCGTATTTACTTTAAAAGAAGGGGTAAATCAGACTGAA
TCACTTAATACTATTGAAAAAAAATTGATGATGTCAAGGCAAGTCAATAAGGACACTATCGATTTTAATTTAAGAACCCC
GATGTCGTTTTCTGGCCCTGAAGAAATAATTTCAATGCTTACCACATTTCTTTCATTTATAGCCGGAATTTCGTTAGTTG
TTGGAATTACGGGTATTTCAAATACAATGTTTACAACCGTTCTTGAAAAAACCCGTGAAATCGGAATTATGAAATCAATT
GGTGCGAGAAATAAGGATATATTATTACTATTTGTATTTAACTCTGCAATAATAGGGCTCGTTGGGGGGTTTTTAGGGTT
AATCCTTGGAACCATAATTTCTCAATTAATCGTCTTATTTATTGCCCAAAGTATGGGTAGTTCTTATCACTTTGTATTAA
GTACTAAATCCGTTGTAATTGCAATAGGATGTTCACTTATTGCAGGAATTATTGCAGGAATTATTCCTGCATACAATGCT
TCAAAATTAAAGCCTGTTGATGCCTTAAAAAGTGATTAA

Upstream 100 bases:

>100_bases
GGTCGTAATAATTTCCATTATAGTCTCAGTAGTACTTGGAAGATTTTACTTAATTTCTAAAAAAAAAGAAATAATTAAAA
ATAGATAAGGGTGGACATTG

Downstream 100 bases:

>100_bases
TTTTCTTTTTTTATTTTTACAAGTTTTTTGTCTTTAAAGATTTAAATCAGAAAATTTATAAATATCATTTATAATTACAA
AGTTGTAATTATATCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKPLKLFKLAAKMVKSSKLRSWITILGIVIGIASVIAIISAGDFLSESVSSKLDGMVSKEITLTASQNNKDKTSELTKRD
VIILKGISDIEYVDIRVSTRNEIRFAGGHETANIIGVDQNVWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIG
INQMVIIGNKQFKVVGILKEDETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKEGVNQTE
SLNTIEKKLMMSRQVNKDTIDFNLRTPMSFSGPEEIISMLTTFLSFIAGISLVVGITGISNTMFTTVLEKTREIGIMKSI
GARNKDILLLFVFNSAIIGLVGGFLGLILGTIISQLIVLFIAQSMGSSYHFVLSTKSVVIAIGCSLIAGIIAGIIPAYNA
SKLKPVDALKSD

Sequences:

>Translated_412_residues
MKPLKLFKLAAKMVKSSKLRSWITILGIVIGIASVIAIISAGDFLSESVSSKLDGMVSKEITLTASQNNKDKTSELTKRD
VIILKGISDIEYVDIRVSTRNEIRFAGGHETANIIGVDQNVWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIG
INQMVIIGNKQFKVVGILKEDETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKEGVNQTE
SLNTIEKKLMMSRQVNKDTIDFNLRTPMSFSGPEEIISMLTTFLSFIAGISLVVGITGISNTMFTTVLEKTREIGIMKSI
GARNKDILLLFVFNSAIIGLVGGFLGLILGTIISQLIVLFIAQSMGSSYHFVLSTKSVVIAIGCSLIAGIIAGIIPAYNA
SKLKPVDALKSD
>Mature_412_residues
MKPLKLFKLAAKMVKSSKLRSWITILGIVIGIASVIAIISAGDFLSESVSSKLDGMVSKEITLTASQNNKDKTSELTKRD
VIILKGISDIEYVDIRVSTRNEIRFAGGHETANIIGVDQNVWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIG
INQMVIIGNKQFKVVGILKEDETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKEGVNQTE
SLNTIEKKLMMSRQVNKDTIDFNLRTPMSFSGPEEIISMLTTFLSFIAGISLVVGITGISNTMFTTVLEKTREIGIMKSI
GARNKDILLLFVFNSAIIGLVGGFLGLILGTIISQLIVLFIAQSMGSSYHFVLSTKSVVIAIGCSLIAGIIAGIIPAYNA
SKLKPVDALKSD

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=412, Percent_Identity=27.1844660194175, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44820; Mature: 44820

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLKLFKLAAKMVKSSKLRSWITILGIVIGIASVIAIISAGDFLSESVSSKLDGMVSKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE
ITLTASQNNKDKTSELTKRDVIILKGISDIEYVDIRVSTRNEIRFAGGHETANIIGVDQN
EEEEECCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCEEEECCCCCEEEEEECCC
VWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIGINQMVIIGNKQFKVVGILKE
CCCCCCHHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEC
DETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKEGVNQTE
CCCCCCCCCCCCCCCEEEECHHEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHCCCHHH
SLNTIEKKLMMSRQVNKDTIDFNLRTPMSFSGPEEIISMLTTFLSFIAGISLVVGITGIS
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NTMFTTVLEKTREIGIMKSIGARNKDILLLFVFNSAIIGLVGGFLGLILGTIISQLIVLF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQSMGSSYHFVLSTKSVVIAIGCSLIAGIIAGIIPAYNASKLKPVDALKSD
HHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKPLKLFKLAAKMVKSSKLRSWITILGIVIGIASVIAIISAGDFLSESVSSKLDGMVSKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE
ITLTASQNNKDKTSELTKRDVIILKGISDIEYVDIRVSTRNEIRFAGGHETANIIGVDQN
EEEEECCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCEEEECCCCCEEEEEECCC
VWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIGINQMVIIGNKQFKVVGILKE
CCCCCCHHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEC
DETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKEGVNQTE
CCCCCCCCCCCCCCCEEEECHHEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHCCCHHH
SLNTIEKKLMMSRQVNKDTIDFNLRTPMSFSGPEEIISMLTTFLSFIAGISLVVGITGIS
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NTMFTTVLEKTREIGIMKSIGARNKDILLLFVFNSAIIGLVGGFLGLILGTIISQLIVLF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQSMGSSYHFVLSTKSVVIAIGCSLIAGIIAGIIPAYNASKLKPVDALKSD
HHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA