| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is mepA [H]
Identifier: 150400314
GI number: 150400314
Start: 1592737
End: 1594080
Strand: Reverse
Name: mepA [H]
Synonym: Mevan_1577
Alternate gene names: 150400314
Gene position: 1594080-1592737 (Counterclockwise)
Preceding gene: 150400315
Following gene: 150400311
Centisome position: 92.68
GC content: 33.85
Gene sequence:
>1344_bases ATGGTTTATAAAAGTGAATTTTTAGGAATTGAGCCCGTAAAGACGTTACTTATAAAATTATCCATTCCAGCTATAATTGG TATGCTTATTATGGCACTTTATAACGTAGTTGACGGGTTTTTTATAGGTAGATGGGTTGGAACACTTGCATTTACAGGAG TTTCATTAATATTCCCATTTCAAATGGTAGTACTTGCTTTTGGAATTACTTTCGGAATTGGGGGTGCATCAATTTTATCA AGAAAACTTGGTGAAGGCAATTTAAAAATTGCAAAAAAAGCTGCTGGAAATTCAATCAGTATGGTGTTAATTTTATCGTT ATTAATAACAACACTAGGAATTTTATTTGCAGTTCCAATTTTAAATCTTTTAGGGGCTTCTGTTGAGGTATTTCCTTACG CTAAAGATTATTATTTAATAATTCTCTATGGGACAATATTTAATAGCTACTTAATTGTTGCAAACAACCTTGTTCGCGCA GAAGGATTGGCAAAAATTGCAATGTTTGGAATGGTTTTTCCAGCGGTTTTAAACACAATGCTTGATGTACTTTTTATTAT CGGATTAAACATGGGTGTAAAAGGGGCTGCAATTGCAACCGTGATTTCACAAGTTGTCGGCGTAATTTATCTTACGTATT ACCAGCTTGGGAAGCATACTAGTATTAAATACAAGGTTAATGATTTTTTAATTGATATAAAAACATGCGTAGAGATAATA CTTATAGGTGCATCCGAATTTGCAAGAACTATCATGAGTAGCGTTCTTTTAGTACTTGGAAACAATTTACTTGGATTTTA TGGCGGGGACATTGCAATTGCAATCTTTGGCGTAGTAAATCGAATTGCAATGCTTTTATTTATGCCAGTACACGGGATAG TTCAAGGACTTCAGCCTATTGTTGGATATAACTATGGGAAAGGAAATTTAAAAAGAGTTAGTGAAGCAGTGAAACTTGCG TTAATCTCGACTACAAGTCTTTGTTTCTTGGGCTTTATCTTCATAATAGCATTTCCAGAGCAATTTATCAGGATATTCAT AACAGATAGTGAGGTAATCTCAAAGGGAATACTCCCAATAAGGATATTTTTCGGATTTTCATTCTTAATAGGGGCCCAAA TGGTAATTAGCGGATTATATCAATCACTTGGAAAAGCATTACCTGCATTTGTTCTTTCCTGTGCAAGGCAGACTTTATTT TTAATTCCCCCAATGATTATTCTTCCAATGTATATCGGGTTAAATGGAATATGGCTCGCAATACCGTTAGGCGACTTTTT AGGGTTTTTACTTTCAGTAGGGCTCATATATATTGATAGAAAAATGCTAAACCTTTCATTTTAA
Upstream 100 bases:
>100_bases GTTTAATGCACCTAAATTTGGAAAAAGAATTTGCTATAGAATTTAAAAAAAAATTAGAATATGACAATAAATTAATGTAA AATATATTATTGTGATAAAT
Downstream 100 bases:
>100_bases TTTTTAAAAAATTACCAGAATTTTAATTTTGAAAGGATACCTTTTTTTTCCCCTTCTTTTTTAGTTTTCTCATGAGAATC AATATACTGATTCATTGGAA
Product: MATE efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MVYKSEFLGIEPVKTLLIKLSIPAIIGMLIMALYNVVDGFFIGRWVGTLAFTGVSLIFPFQMVVLAFGITFGIGGASILS RKLGEGNLKIAKKAAGNSISMVLILSLLITTLGILFAVPILNLLGASVEVFPYAKDYYLIILYGTIFNSYLIVANNLVRA EGLAKIAMFGMVFPAVLNTMLDVLFIIGLNMGVKGAAIATVISQVVGVIYLTYYQLGKHTSIKYKVNDFLIDIKTCVEII LIGASEFARTIMSSVLLVLGNNLLGFYGGDIAIAIFGVVNRIAMLLFMPVHGIVQGLQPIVGYNYGKGNLKRVSEAVKLA LISTTSLCFLGFIFIIAFPEQFIRIFITDSEVISKGILPIRIFFGFSFLIGAQMVISGLYQSLGKALPAFVLSCARQTLF LIPPMIILPMYIGLNGIWLAIPLGDFLGFLLSVGLIYIDRKMLNLSF
Sequences:
>Translated_447_residues MVYKSEFLGIEPVKTLLIKLSIPAIIGMLIMALYNVVDGFFIGRWVGTLAFTGVSLIFPFQMVVLAFGITFGIGGASILS RKLGEGNLKIAKKAAGNSISMVLILSLLITTLGILFAVPILNLLGASVEVFPYAKDYYLIILYGTIFNSYLIVANNLVRA EGLAKIAMFGMVFPAVLNTMLDVLFIIGLNMGVKGAAIATVISQVVGVIYLTYYQLGKHTSIKYKVNDFLIDIKTCVEII LIGASEFARTIMSSVLLVLGNNLLGFYGGDIAIAIFGVVNRIAMLLFMPVHGIVQGLQPIVGYNYGKGNLKRVSEAVKLA LISTTSLCFLGFIFIIAFPEQFIRIFITDSEVISKGILPIRIFFGFSFLIGAQMVISGLYQSLGKALPAFVLSCARQTLF LIPPMIILPMYIGLNGIWLAIPLGDFLGFLLSVGLIYIDRKMLNLSF >Mature_447_residues MVYKSEFLGIEPVKTLLIKLSIPAIIGMLIMALYNVVDGFFIGRWVGTLAFTGVSLIFPFQMVVLAFGITFGIGGASILS RKLGEGNLKIAKKAAGNSISMVLILSLLITTLGILFAVPILNLLGASVEVFPYAKDYYLIILYGTIFNSYLIVANNLVRA EGLAKIAMFGMVFPAVLNTMLDVLFIIGLNMGVKGAAIATVISQVVGVIYLTYYQLGKHTSIKYKVNDFLIDIKTCVEII LIGASEFARTIMSSVLLVLGNNLLGFYGGDIAIAIFGVVNRIAMLLFMPVHGIVQGLQPIVGYNYGKGNLKRVSEAVKLA LISTTSLCFLGFIFIIAFPEQFIRIFITDSEVISKGILPIRIFFGFSFLIGAQMVISGLYQSLGKALPAFVLSCARQTLF LIPPMIILPMYIGLNGIWLAIPLGDFLGFLLSVGLIYIDRKMLNLSF
Specific function: Multidrug resistance efflux protein [H]
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 48605; Mature: 48605
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYKSEFLGIEPVKTLLIKLSIPAIIGMLIMALYNVVDGFFIGRWVGTLAFTGVSLIFPF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMVVLAFGITFGIGGASILSRKLGEGNLKIAKKAAGNSISMVLILSLLITTLGILFAVPI HHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LNLLGASVEVFPYAKDYYLIILYGTIFNSYLIVANNLVRAEGLAKIAMFGMVFPAVLNTM HHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVLFIIGLNMGVKGAAIATVISQVVGVIYLTYYQLGKHTSIKYKVNDFLIDIKTCVEII HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH LIGASEFARTIMSSVLLVLGNNLLGFYGGDIAIAIFGVVNRIAMLLFMPVHGIVQGLQPI HHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYNYGKGNLKRVSEAVKLALISTTSLCFLGFIFIIAFPEQFIRIFITDSEVISKGILPI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCHHH RIFFGFSFLIGAQMVISGLYQSLGKALPAFVLSCARQTLFLIPPMIILPMYIGLNGIWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE IPLGDFLGFLLSVGLIYIDRKMLNLSF EEHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVYKSEFLGIEPVKTLLIKLSIPAIIGMLIMALYNVVDGFFIGRWVGTLAFTGVSLIFPF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMVVLAFGITFGIGGASILSRKLGEGNLKIAKKAAGNSISMVLILSLLITTLGILFAVPI HHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LNLLGASVEVFPYAKDYYLIILYGTIFNSYLIVANNLVRAEGLAKIAMFGMVFPAVLNTM HHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVLFIIGLNMGVKGAAIATVISQVVGVIYLTYYQLGKHTSIKYKVNDFLIDIKTCVEII HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH LIGASEFARTIMSSVLLVLGNNLLGFYGGDIAIAIFGVVNRIAMLLFMPVHGIVQGLQPI HHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYNYGKGNLKRVSEAVKLALISTTSLCFLGFIFIIAFPEQFIRIFITDSEVISKGILPI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCHHH RIFFGFSFLIGAQMVISGLYQSLGKALPAFVLSCARQTLFLIPPMIILPMYIGLNGIWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE IPLGDFLGFLLSVGLIYIDRKMLNLSF EEHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA