| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400287
Identifier: 150400287
GI number: 150400287
Start: 1563533
End: 1564546
Strand: Reverse
Name: 150400287
Synonym: Mevan_1550
Alternate gene names: NA
Gene position: 1564546-1563533 (Counterclockwise)
Preceding gene: 150400294
Following gene: 150400284
Centisome position: 90.96
GC content: 31.85
Gene sequence:
>1014_bases ATGGACGTATGGGTTGACCTGACAAACTCCCCGCATATTCATTACTTTTCACAACTTATAGACAAGTTTAATCGTAAAGG AATTGAATATTATATTACAGCAAGGAAATTTCAAAATTTAGAAGAATTAATAGATATTTATGGGTATGATTACTTTTCAG TAGGTGACCATGCTTATTCACTTGATGAAAAGCTTATAAATTCATCTAAAAGAATAGTAGAGCTTACAAAAATTGTAAAA AAACTAAATCCCAAAGTTGCAATTGCAAAACACTCAGTAGAACTTCCAAGGGTCGCTTTTGGAATGAATATTCCTTCAAT ATTTGTTGTTGATAACGAGCATGCAAGTGCCCAAAATAGATTAACAATACCTCTTGTAACTAATATCATATCCCCAGAAG GCACTAAAAAAGCATTTAATGGAAATTCTTTTGGAAGCGATATAACATCTTTTGAAGGAACCTGTGAAGTTTCAAACGTG AATTCAAGGCTTTCATCAAATTTTTCAATTGATGAACATATTTTAGAAAAAATCGGTGCAAATAAGTCCATTCCCACTGT GGTATTAAGGCCAAGACCTAATTCTTCATATTGCAACGGTAAAAAAGACATTGTTCCAGAAATTATTGAAAATTTAATAA AAGAGATGGACTGCAACATTGTTGCATTTCCTAGGGATGAAGTACAAAGAGAAAAATACGTTTCATTAGGAATTATTGTT CCAAAAACAATCGATGCTATTTCATTACTATACTGTTCTGACGCAATGATTGGTGCTGGAGGAACAATGAATAGGGAAGC TGCAGTTTTAGGAGTTCCAACAATTTCTTGCTATCCTGAAAAGCTTTTGGGTGTTGATACATACTTAATGGAAAAAGAAA GGATGATACATACAAGAGAAATTGATGAAATAATGAATTATGTTTTAGAAAATATTGGAAAAAGAAATAATAACATAGCT TTAGAAGACCCTACCGGATTAATGTTTGAAAGGGTTACTGAATATATTGGTTAA
Upstream 100 bases:
>100_bases AAATAATTATATATAAAATGGTACTATTTTGTTAAGAACTTTTGTATTTACTACCCGCCGCTAATATTACTTTAGTGATC CAATTGTTATTGGTGATTTG
Downstream 100 bases:
>100_bases TTAACGTTTAAATGAAAATAACTTAAGAAGAAGGATTTACATGAACCATGCAGTGTTTTATCTCTTTTAAATTGCATTCA AGTTCATTGTGGACATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MDVWVDLTNSPHIHYFSQLIDKFNRKGIEYYITARKFQNLEELIDIYGYDYFSVGDHAYSLDEKLINSSKRIVELTKIVK KLNPKVAIAKHSVELPRVAFGMNIPSIFVVDNEHASAQNRLTIPLVTNIISPEGTKKAFNGNSFGSDITSFEGTCEVSNV NSRLSSNFSIDEHILEKIGANKSIPTVVLRPRPNSSYCNGKKDIVPEIIENLIKEMDCNIVAFPRDEVQREKYVSLGIIV PKTIDAISLLYCSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVDTYLMEKERMIHTREIDEIMNYVLENIGKRNNNIA LEDPTGLMFERVTEYIG
Sequences:
>Translated_337_residues MDVWVDLTNSPHIHYFSQLIDKFNRKGIEYYITARKFQNLEELIDIYGYDYFSVGDHAYSLDEKLINSSKRIVELTKIVK KLNPKVAIAKHSVELPRVAFGMNIPSIFVVDNEHASAQNRLTIPLVTNIISPEGTKKAFNGNSFGSDITSFEGTCEVSNV NSRLSSNFSIDEHILEKIGANKSIPTVVLRPRPNSSYCNGKKDIVPEIIENLIKEMDCNIVAFPRDEVQREKYVSLGIIV PKTIDAISLLYCSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVDTYLMEKERMIHTREIDEIMNYVLENIGKRNNNIA LEDPTGLMFERVTEYIG >Mature_337_residues MDVWVDLTNSPHIHYFSQLIDKFNRKGIEYYITARKFQNLEELIDIYGYDYFSVGDHAYSLDEKLINSSKRIVELTKIVK KLNPKVAIAKHSVELPRVAFGMNIPSIFVVDNEHASAQNRLTIPLVTNIISPEGTKKAFNGNSFGSDITSFEGTCEVSNV NSRLSSNFSIDEHILEKIGANKSIPTVVLRPRPNSSYCNGKKDIVPEIIENLIKEMDCNIVAFPRDEVQREKYVSLGIIV PKTIDAISLLYCSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVDTYLMEKERMIHTREIDEIMNYVLENIGKRNNNIA LEDPTGLMFERVTEYIG
Specific function: Unknown
COG id: COG1817
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007152 [H]
Pfam domain/function: PF04007 DUF354 [H]
EC number: NA
Molecular weight: Translated: 37964; Mature: 37964
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVWVDLTNSPHIHYFSQLIDKFNRKGIEYYITARKFQNLEELIDIYGYDYFSVGDHAYS CCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHCCCEEECCCHHHH LDEKLINSSKRIVELTKIVKKLNPKVAIAKHSVELPRVAFGMNIPSIFVVDNEHASAQNR HHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCEEEEEECCCCCCCCC LTIPLVTNIISPEGTKKAFNGNSFGSDITSFEGTCEVSNVNSRLSSNFSIDEHILEKIGA EEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHCC NKSIPTVVLRPRPNSSYCNGKKDIVPEIIENLIKEMDCNIVAFPRDEVQREKYVSLGIIV CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEC PKTIDAISLLYCSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVDTYLMEKERMIHTRE CCHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH IDEIMNYVLENIGKRNNNIALEDPTGLMFERVTEYIG HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MDVWVDLTNSPHIHYFSQLIDKFNRKGIEYYITARKFQNLEELIDIYGYDYFSVGDHAYS CCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHCCCEEECCCHHHH LDEKLINSSKRIVELTKIVKKLNPKVAIAKHSVELPRVAFGMNIPSIFVVDNEHASAQNR HHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCEEEEEECCCCCCCCC LTIPLVTNIISPEGTKKAFNGNSFGSDITSFEGTCEVSNVNSRLSSNFSIDEHILEKIGA EEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHCC NKSIPTVVLRPRPNSSYCNGKKDIVPEIIENLIKEMDCNIVAFPRDEVQREKYVSLGIIV CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEC PKTIDAISLLYCSDAMIGAGGTMNREAAVLGVPTISCYPEKLLGVDTYLMEKERMIHTRE CCHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH IDEIMNYVLENIGKRNNNIALEDPTGLMFERVTEYIG HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]