| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400274
Identifier: 150400274
GI number: 150400274
Start: 1551224
End: 1551775
Strand: Reverse
Name: 150400274
Synonym: Mevan_1536
Alternate gene names: NA
Gene position: 1551775-1551224 (Counterclockwise)
Preceding gene: 150400275
Following gene: 150400268
Centisome position: 90.22
GC content: 32.61
Gene sequence:
>552_bases ATGGCTTATATTGATATTGACTGTAACGATATTAAAGGCAAAGAAATCTACGAAAAAGTTATACAGACATCGTTAGAAGA TTTAGTTTTAGGAAAAGCGATTGTAAAATCAAAGATGATTTGTAGGCAGGATATTCCATACTTTATAATTGGAATACTGC CAAAATCAACCTCGAAATTAATAAGGTTAAGAGATGTTGTAACCGTTGAGGAGACAGTTGAAGAAAATGGGAAAGTAGTC TACAAGTTAAAAATAGATGATGAAACGTATGCTACAGAACTTTTAGAGAAAATAAACGTGATAGATCAGCCTTCAAGATT TGAAATCATAACGGATTCAAAAATAGATTCGGATATGATAATTCATGATGCAAAGGAAGACTTTGTTGAAAGGGTTTTAG ACTTCATGAACCGGGTTTTTCCAGAAGGAATGAGAGTTAGAAAAACATTTCGTGGAACTTCAATAGTGATGGTTGCATCT GAAAAACCAATTGAAGAACATTGGGAAAAAGAAGCTTTAAACCTCCAAAAGGAGCTTGAACAATTTAAATGA
Upstream 100 bases:
>100_bases GAAATATTTAATATAACATTTTTTTCCAGAAATATAGTTACTATTTGTATAATCTATATTATCCAATTTACATTATTTAA CTCTGTATAAAGGTGTTTTA
Downstream 100 bases:
>100_bases TTTATTGGCCCCGTTAATTAGGATAATTGCTATAAAAAGTAATTCAAACCAGGTGTGCAGAGCCATTAAGGGAATGCCCA TCATACTGGTTAGAATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAYIDIDCNDIKGKEIYEKVIQTSLEDLVLGKAIVKSKMICRQDIPYFIIGILPKSTSKLIRLRDVVTVEETVEENGKVV YKLKIDDETYATELLEKINVIDQPSRFEIITDSKIDSDMIIHDAKEDFVERVLDFMNRVFPEGMRVRKTFRGTSIVMVAS EKPIEEHWEKEALNLQKELEQFK
Sequences:
>Translated_183_residues MAYIDIDCNDIKGKEIYEKVIQTSLEDLVLGKAIVKSKMICRQDIPYFIIGILPKSTSKLIRLRDVVTVEETVEENGKVV YKLKIDDETYATELLEKINVIDQPSRFEIITDSKIDSDMIIHDAKEDFVERVLDFMNRVFPEGMRVRKTFRGTSIVMVAS EKPIEEHWEKEALNLQKELEQFK >Mature_182_residues AYIDIDCNDIKGKEIYEKVIQTSLEDLVLGKAIVKSKMICRQDIPYFIIGILPKSTSKLIRLRDVVTVEETVEENGKVVY KLKIDDETYATELLEKINVIDQPSRFEIITDSKIDSDMIIHDAKEDFVERVLDFMNRVFPEGMRVRKTFRGTSIVMVASE KPIEEHWEKEALNLQKELEQFK
Specific function: Unknown
COG id: COG4051
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016762 [H]
Pfam domain/function: PF09886 DUF2113 [H]
EC number: NA
Molecular weight: Translated: 21303; Mature: 21172
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYIDIDCNDIKGKEIYEKVIQTSLEDLVLGKAIVKSKMICRQDIPYFIIGILPKSTSKL CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH IRLRDVVTVEETVEENGKVVYKLKIDDETYATELLEKINVIDQPSRFEIITDSKIDSDMI HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCE IHDAKEDFVERVLDFMNRVFPEGMRVRKTFRGTSIVMVASEKPIEEHWEKEALNLQKELE EECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH QFK HCC >Mature Secondary Structure AYIDIDCNDIKGKEIYEKVIQTSLEDLVLGKAIVKSKMICRQDIPYFIIGILPKSTSKL EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH IRLRDVVTVEETVEENGKVVYKLKIDDETYATELLEKINVIDQPSRFEIITDSKIDSDMI HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCE IHDAKEDFVERVLDFMNRVFPEGMRVRKTFRGTSIVMVASEKPIEEHWEKEALNLQKELE EECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH QFK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]