| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400266
Identifier: 150400266
GI number: 150400266
Start: 1544006
End: 1544587
Strand: Reverse
Name: 150400266
Synonym: Mevan_1527
Alternate gene names: NA
Gene position: 1544587-1544006 (Counterclockwise)
Preceding gene: 150400267
Following gene: 150400265
Centisome position: 89.8
GC content: 33.85
Gene sequence:
>582_bases GTGAATATTAAGGAAACATTAAATAATATTAAAGGTACATTAGGGAATTTTAAGCAGGAGTTCGATACCCGTTATGTTAT AAGGGGACTGATAGATGGTTCACTGTCAACTCTTGGTGTTGTAATTGGAGCAAGCGGCGGTGAAACATCAACTATTGTTG CAGCGGGGATTGGCGGTGGAATTGCGAATGGAATTTCAAATGTTTTAGGTGCATTAACTGCTGAAAGAGCAATGATTGAA GAAGACCGTGAAAGAAAAGAAAAAAGTCTTTTGATAATGAACGGCAATTTAAAGTCAAGTCATGAATACAAATATAAAAT AAATAAAACCCTTTATAGTGGAACTTATGATGGAATTTCAACAACTATTGGGGCAGTGATTCCAGTACTGCCCTTTTTCA TTTTTGAACAAAAAATTGCGCTTATTTTTGCAGTTGCTTCTACTCTTATGATACTTCTTGGCTTGGGCATATTTATTGGT AAACTTTCAAGAGAAAATCTGGCTATTTCAGGATTAAAAATGGTTTTAGGAGGAATTATTGTTACAATAATATGTTTTGG AATTGAAAGGTTTTTTGCATAA
Upstream 100 bases:
>100_bases TAATTAATTACGTATTATGATAACTAACTTAAAAATAAATAATATTAAAAATAAAATGATTTTAGAATAAGTAAGTCTTA AAAATAGAAGGGGATTTTTA
Downstream 100 bases:
>100_bases ATATTTTTAACTAAATCGAAATATTAAAGTTAACACGTGGAGTTTACCTATCTTAAAGGTTAAAATATGAACAGTCGTAA GTTTTTTAGAAAATTAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNIKETLNNIKGTLGNFKQEFDTRYVIRGLIDGSLSTLGVVIGASGGETSTIVAAGIGGGIANGISNVLGALTAERAMIE EDRERKEKSLLIMNGNLKSSHEYKYKINKTLYSGTYDGISTTIGAVIPVLPFFIFEQKIALIFAVASTLMILLGLGIFIG KLSRENLAISGLKMVLGGIIVTIICFGIERFFA
Sequences:
>Translated_193_residues MNIKETLNNIKGTLGNFKQEFDTRYVIRGLIDGSLSTLGVVIGASGGETSTIVAAGIGGGIANGISNVLGALTAERAMIE EDRERKEKSLLIMNGNLKSSHEYKYKINKTLYSGTYDGISTTIGAVIPVLPFFIFEQKIALIFAVASTLMILLGLGIFIG KLSRENLAISGLKMVLGGIIVTIICFGIERFFA >Mature_193_residues MNIKETLNNIKGTLGNFKQEFDTRYVIRGLIDGSLSTLGVVIGASGGETSTIVAAGIGGGIANGISNVLGALTAERAMIE EDRERKEKSLLIMNGNLKSSHEYKYKINKTLYSGTYDGISTTIGAVIPVLPFFIFEQKIALIFAVASTLMILLGLGIFIG KLSRENLAISGLKMVLGGIIVTIICFGIERFFA
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006682 - InterPro: IPR008217 [H]
Pfam domain/function: PF01988 DUF125 [H]
EC number: NA
Molecular weight: Translated: 20655; Mature: 20655
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKETLNNIKGTLGNFKQEFDTRYVIRGLIDGSLSTLGVVIGASGGETSTIVAAGIGGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCEEEEECCCCH IANGISNVLGALTAERAMIEEDRERKEKSLLIMNGNLKSSHEYKYKINKTLYSGTYDGIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECHHEECCCCCHHH TTIGAVIPVLPFFIFEQKIALIFAVASTLMILLGLGIFIGKLSRENLAISGLKMVLGGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTIICFGIERFFA HHHHHHHHHHHCC >Mature Secondary Structure MNIKETLNNIKGTLGNFKQEFDTRYVIRGLIDGSLSTLGVVIGASGGETSTIVAAGIGGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCEEEEECCCCH IANGISNVLGALTAERAMIEEDRERKEKSLLIMNGNLKSSHEYKYKINKTLYSGTYDGIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECHHEECCCCCHHH TTIGAVIPVLPFFIFEQKIALIFAVASTLMILLGLGIFIGKLSRENLAISGLKMVLGGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTIICFGIERFFA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]