Click here to switch to the map view.

The map label for this gene is rps2P

Identifier: 150400263

GI number: 150400263

Start: 1540603

End: 1541268

Strand: Reverse

Name: rps2P

Synonym: Mevan_1524

Alternate gene names: 150400263

Gene position: 1541268-1540603 (Counterclockwise)

Preceding gene: 150400265

Following gene: 150400262

Centisome position: 89.61

GC content: 38.29

Gene sequence:

>666_bases
ATGTCAGACGAGAACCTATTGACCAGTTTGGACACATATCTCGCATCAGGTATCCACATAGGTACACAGCAAAAAACCGA
AGACATGAAAAGATTCATCTACAGAGTAAGATCTGATGGTTTATACGTTTTAGACGTTAGAAAAACTGACGAAAGATTAA
GACTCGCAGCAAAATTCCTATCAAACTACGAGCCACAAGACATTATGGCAGTTACAAGAAGAGTTTACTCAGTAGGCCCT
TTGAAAAAATTCGGTGAAACTACAGGAATAAACACGGTTGCTGGAAGATTTGTGCCTGGGACTTTAACAAACCCTGCTGC
TAAAAAATTCGCTGAACCTGAAGTAATGTTTTTAAGTGACCCTAGAGTTGACAAACAGGCTTTAAAGGAAGCTATCGAAA
TTGGAATACCTATTGTAAGTATGTGCGATACTGAACACTTAACTGCACACCTTGACTTTATTATTCCAACAAATAACAAA
GGTAGAAAATCAGTATCACTGATGTACTTCCTTATTGCAAGGGAATATTTAAAGAACAGAGGCATAATTGGGGAAGAAGT
TCCTTTCAGCTATGACGATTTCCTTGAAAAGGCAATGGGTGCAAAAGTAAAAATGCCTCAGCAAAATCAGAGAGGAAGGC
CTCAAAGAAGGTTCCAAAGAAGATAA

Upstream 100 bases:

>100_bases
AAATTTTAAAAATATCGAAAAACGAATACGAATAAAATACTACGAAAGGGCTTTATTTTTGGAAAAAGCCAAGAAACCAC
TTTTTTGGAGGAGAAGAAAA

Downstream 100 bases:

>100_bases
TTACATTTCTTAAAACAAAATACGTGATTTAAATGGACGACTTATATCTCGAATGTCTGGTTTGCGATGACGTAACTTTG
CACGAAGTTGTAAAGGAAGT

Product: 30S ribosomal protein S2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSDENLLTSLDTYLASGIHIGTQQKTEDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFLSNYEPQDIMAVTRRVYSVGP
LKKFGETTGINTVAGRFVPGTLTNPAAKKFAEPEVMFLSDPRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNK
GRKSVSLMYFLIAREYLKNRGIIGEEVPFSYDDFLEKAMGAKVKMPQQNQRGRPQRRFQRR

Sequences:

>Translated_221_residues
MSDENLLTSLDTYLASGIHIGTQQKTEDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFLSNYEPQDIMAVTRRVYSVGP
LKKFGETTGINTVAGRFVPGTLTNPAAKKFAEPEVMFLSDPRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNK
GRKSVSLMYFLIAREYLKNRGIIGEEVPFSYDDFLEKAMGAKVKMPQQNQRGRPQRRFQRR
>Mature_220_residues
SDENLLTSLDTYLASGIHIGTQQKTEDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFLSNYEPQDIMAVTRRVYSVGPL
KKFGETTGINTVAGRFVPGTLTNPAAKKFAEPEVMFLSDPRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNKG
RKSVSLMYFLIAREYLKNRGIIGEEVPFSYDDFLEKAMGAKVKMPQQNQRGRPQRRFQRR

Specific function: Unknown

COG id: COG0052

COG function: function code J; Ribosomal protein S2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S2P family

Homologues:

Organism=Homo sapiens, GI9845502, Length=190, Percent_Identity=37.8947368421053, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI59859885, Length=190, Percent_Identity=37.8947368421053, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17554768, Length=177, Percent_Identity=40.1129943502825, Blast_Score=137, Evalue=6e-33,
Organism=Saccharomyces cerevisiae, GI6323077, Length=179, Percent_Identity=36.3128491620112, Blast_Score=142, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6321653, Length=179, Percent_Identity=35.7541899441341, Blast_Score=139, Evalue=2e-34,
Organism=Drosophila melanogaster, GI45551198, Length=177, Percent_Identity=34.4632768361582, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24639112, Length=177, Percent_Identity=34.4632768361582, Blast_Score=128, Evalue=3e-30,
Organism=Drosophila melanogaster, GI17136518, Length=177, Percent_Identity=34.4632768361582, Blast_Score=128, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS2_METVS (A6USE6)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001324030.1
- ProteinModelPortal:   A6USE6
- SMR:   A6USE6
- STRING:   A6USE6
- GeneID:   5325099
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_1524
- eggNOG:   arNOG08216
- HOGENOM:   HBG736296
- OMA:   NTVAGRF
- ProtClustDB:   PRK04020
- GO:   GO:0006412
- HAMAP:   MF_00291_A
- InterPro:   IPR001865
- InterPro:   IPR018130
- InterPro:   IPR005707
- PANTHER:   PTHR11489
- PRINTS:   PR00395
- TIGRFAMs:   TIGR01012

Pfam domain/function: PF00318 Ribosomal_S2; SSF52313 Ribosomal_S2

EC number: NA

Molecular weight: Translated: 25253; Mature: 25121

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00962 RIBOSOMAL_S2_1; PS00963 RIBOSOMAL_S2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDENLLTSLDTYLASGIHIGTQQKTEDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
SNYEPQDIMAVTRRVYSVGPLKKFGETTGINTVAGRFVPGTLTNPAAKKFAEPEVMFLSD
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEEEECC
PRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNKGRKSVSLMYFLIAREYLKNR
CCCCHHHHHHHHHHCCCHHHHCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
GIIGEEVPFSYDDFLEKAMGAKVKMPQQNQRGRPQRRFQRR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
SDENLLTSLDTYLASGIHIGTQQKTEDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
SNYEPQDIMAVTRRVYSVGPLKKFGETTGINTVAGRFVPGTLTNPAAKKFAEPEVMFLSD
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEEEECC
PRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNKGRKSVSLMYFLIAREYLKNR
CCCCHHHHHHHHHHCCCHHHHCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
GIIGEEVPFSYDDFLEKAMGAKVKMPQQNQRGRPQRRFQRR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA