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The map label for this gene is tpiA [H]

Identifier: 150400244

GI number: 150400244

Start: 1523224

End: 1523877

Strand: Reverse

Name: tpiA [H]

Synonym: Mevan_1505

Alternate gene names: 150400244

Gene position: 1523877-1523224 (Counterclockwise)

Preceding gene: 150400245

Following gene: 150400243

Centisome position: 88.6

GC content: 33.18

Gene sequence:

>654_bases
ATTATAATAAATTATAAAACATATTCTGAAAGCACTGGAAAAAACGGCTTAAAAATTGCAAAAGCTGCAGAAAAAGTATC
AGATGAATCTGGAATCACTATTGCTGTAGCACCTCAGTTTTTAGATTTAAAAACGATTTTAAACGAAGTAAGTATTCCAG
TATATGCTCAACACATGGATCCAGTAGTTTCTGGAAGTAGTACTGGACATATATCCTCAGAATCATTAAAAGATGCCGGT
GTTTTTGGAACCCTTTTAAACCATTCTGAAAAAAGAATGCAACTTTTTGACATTGAAAAGTGTATAGAAATTTCAAATAA
ACTTGATTTAAAAACGGTTGTATGTACAAATAATATCCCTGTTTCAAAAGCTGTTTCTGCATTAAATCCAACTTCAATTG
CAGTTGAACCTCCAGAATTAATTGGGAGCGGAATTCCTGTTTCAAAAGCAAACCCCGAAATAGTATCAGGTACTGTTTTA
GAAGTTCGGAGCATAAATAAAAGCGTTGAAATTCTTTGTGGTGCAGGAATATCTAAAGGTGAAGATTTAAAAGCTGCAAT
CGAACTTGGAACAAACGGTGTTTTACTTGCATCGGGAATTGTAAGGGCTAAAAACGTGGAAGACGCAATCAGAGAATTAA
TTACTAAAATTTAA

Upstream 100 bases:

>100_bases
AACTTTCCCGTTTCTTTTTTAAGGTTATTTATAAATATTATTTTTTTAAAAGTTACATATTGATAATAATTAAAAGGGCG
GTGGTACTATCAATCCAAAT

Downstream 100 bases:

>100_bases
TTTTTATTTTATTTTATTTTATTTTATTTTATTTTTTTAAGATAGTTTTGGTAAAGTATGAATGAACCATACAGAAAGAT
TTATATATTTTAAATGTATT

Product: triosephosphate isomerase

Products: NA

Alternate protein names: TIM; Triose-phosphate isomerase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIINYKTYSESTGKNGLKIAKAAEKVSDESGITIAVAPQFLDLKTILNEVSIPVYAQHMDPVVSGSSTGHISSESLKDAG
VFGTLLNHSEKRMQLFDIEKCIEISNKLDLKTVVCTNNIPVSKAVSALNPTSIAVEPPELIGSGIPVSKANPEIVSGTVL
EVRSINKSVEILCGAGISKGEDLKAAIELGTNGVLLASGIVRAKNVEDAIRELITKI

Sequences:

>Translated_217_residues
MIINYKTYSESTGKNGLKIAKAAEKVSDESGITIAVAPQFLDLKTILNEVSIPVYAQHMDPVVSGSSTGHISSESLKDAG
VFGTLLNHSEKRMQLFDIEKCIEISNKLDLKTVVCTNNIPVSKAVSALNPTSIAVEPPELIGSGIPVSKANPEIVSGTVL
EVRSINKSVEILCGAGISKGEDLKAAIELGTNGVLLASGIVRAKNVEDAIRELITKI
>Mature_217_residues
MIINYKTYSESTGKNGLKIAKAAEKVSDESGITIAVAPQFLDLKTILNEVSIPVYAQHMDPVVSGSSTGHISSESLKDAG
VFGTLLNHSEKRMQLFDIEKCIEISNKLDLKTVVCTNNIPVSKAVSALNPTSIAVEPPELIGSGIPVSKANPEIVSGTVL
EVRSINKSVEILCGAGISKGEDLKAAIELGTNGVLLASGIVRAKNVEDAIRELITKI

Specific function: Unknown

COG id: COG0149

COG function: function code G; Triosephosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the triosephosphate isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000652
- InterPro:   IPR022891
- InterPro:   IPR020861 [H]

Pfam domain/function: PF00121 TIM [H]

EC number: =5.3.1.1 [H]

Molecular weight: Translated: 22925; Mature: 22925

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00171 TIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINYKTYSESTGKNGLKIAKAAEKVSDESGITIAVAPQFLDLKTILNEVSIPVYAQHMD
CEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEHHCC
PVVSGSSTGHISSESLKDAGVFGTLLNHSEKRMQLFDIEKCIEISNKLDLKTVVCTNNIP
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VSKAVSALNPTSIAVEPPELIGSGIPVSKANPEIVSGTVLEVRSINKSVEILCGAGISKG
HHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCEECCCEEEEECCCCCEEEEECCCCCCC
EDLKAAIELGTNGVLLASGIVRAKNVEDAIRELITKI
CCCEEEEEECCCCEEEECCCHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIINYKTYSESTGKNGLKIAKAAEKVSDESGITIAVAPQFLDLKTILNEVSIPVYAQHMD
CEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEHHCC
PVVSGSSTGHISSESLKDAGVFGTLLNHSEKRMQLFDIEKCIEISNKLDLKTVVCTNNIP
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VSKAVSALNPTSIAVEPPELIGSGIPVSKANPEIVSGTVLEVRSINKSVEILCGAGISKG
HHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCEECCCEEEEECCCCCEEEEECCCCCCC
EDLKAAIELGTNGVLLASGIVRAKNVEDAIRELITKI
CCCEEEEEECCCCEEEECCCHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]