| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is rpl14e
Identifier: 150400237
GI number: 150400237
Start: 1519210
End: 1519443
Strand: Reverse
Name: rpl14e
Synonym: Mevan_1498
Alternate gene names: 150400237
Gene position: 1519443-1519210 (Counterclockwise)
Preceding gene: 150400238
Following gene: 150400233
Centisome position: 88.34
GC content: 37.18
Gene sequence:
>234_bases ATGGCAGCAATTGAAGTAGGAAGAGTTTGCATCAAAACCTTAGGTAGAGAAGCAGGAAACGTCTGCGTTATAGTTGAAGT ATTAGACAAAAACTACATAGTTGTAGACGGTAACGTTAAAAGAAGAAGATGCAACGTAAAACACGTTGAACCAACTGACA AAAAAGTCGAATTAGAAAAAGGAGCTTCAACAGAAGAGGTTAAGTTATCCTTAGATGCGGCAGGCTTATTATAA
Upstream 100 bases:
>100_bases CAATAAAATAGATTACTGATGATAGTAAATCTCTCTGTTTGAAGAATGACGTGCGATTGGCGACAATCACATTAACAAAA AATAAGACGAGGTAGTAATT
Downstream 100 bases:
>100_bases CTCCAAAAATTCAGGTGCTGAATTTAGCATCTGCTCTTTTTATTCTTTTTTAAGTTGTTTAAGTTATAATTTTAAATTTA ATTTAAAAAATAACATCTAA
Product: 50S ribosomal protein L14e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAAIEVGRVCIKTLGREAGNVCVIVEVLDKNYIVVDGNVKRRRCNVKHVEPTDKKVELEKGASTEEVKLSLDAAGLL
Sequences:
>Translated_77_residues MAAIEVGRVCIKTLGREAGNVCVIVEVLDKNYIVVDGNVKRRRCNVKHVEPTDKKVELEKGASTEEVKLSLDAAGLL >Mature_76_residues AAIEVGRVCIKTLGREAGNVCVIVEVLDKNYIVVDGNVKRRRCNVKHVEPTDKKVELEKGASTEEVKLSLDAAGLL
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L14e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL14E_METVS (A6USC0)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001324004.1 - ProteinModelPortal: A6USC0 - SMR: A6USC0 - STRING: A6USC0 - GeneID: 5325182 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_1498 - eggNOG: arNOG11588 - HOGENOM: HBG551856 - OMA: HIEPTDK - ProtClustDB: PRK04333 - GO: GO:0005840 - HAMAP: MF_00721 - InterPro: IPR014722 - Gene3D: G3DSA:2.30.30.30
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8392; Mature: 8261
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIEVGRVCIKTLGREAGNVCVIVEVLDKNYIVVDGNVKRRRCNVKHVEPTDKKVELEK CCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCEEEECC GASTEEVKLSLDAAGLL CCCCCEEEEEECCCCCC >Mature Secondary Structure AAIEVGRVCIKTLGREAGNVCVIVEVLDKNYIVVDGNVKRRRCNVKHVEPTDKKVELEK CCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCEEEECC GASTEEVKLSLDAAGLL CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA