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The map label for this gene is ycjC [C]

Identifier: 150400183

GI number: 150400183

Start: 1468839

End: 1469417

Strand: Reverse

Name: ycjC [C]

Synonym: Mevan_1444

Alternate gene names: 150400183

Gene position: 1469417-1468839 (Counterclockwise)

Preceding gene: 150400184

Following gene: 150400182

Centisome position: 85.43

GC content: 33.33

Gene sequence:

>579_bases
ATGACAGAAAAGAATCAGTTAGGTAGTAAAATAACTCAATTAAGAGAATCAAAAGGCATGTCTATTGAAGACCTTGCAAA
AGCGAGTGATAGTAGTATTGAACTTATTGAATGTCTTGAAAAGGGAAATTTAGTTCCCTCATTAACTCCTCTTTTAAAAA
TCGCAAGGGCACTTTCAGTTAGACTTGGTACTTTTCTTGATGATGCCCCACAAAATGGGCCAGTTATAACAAAATCAGGA
AATTACGAAAGCGTTGTCAGGTTTTCTGGAAAATTAAATGGGGCAGTTGATAGTAAATTAAACTTTTATTCTCTTGCTTT
TGAAAAACAAGATAGGCATATGGAACCATTTTTAATTGATGTTTACCCATTTGAAACAAACGAATACAAGTTATCGTCCC
ATGAAGGTGAAGAATTTATCTTTGTAATAAGTGGTGAAATAGAAATATTATATGGTAGCGAAAAATACCTGCTTAAAACA
GGAGATAGTATTTATTATGATTCAGTAGTACCTCACGACTTACACGCTTTTGGAAATTCCCTTGCAAAAATACTTGCCGT
AATCTACGCTCCATTTTAA

Upstream 100 bases:

>100_bases
GCCCATAAAAAAATAGATAATTTTTTAAAAGTTGAAAGTCTATTAAAATTGAAAAACTTTTAAAGTTAACTGTTTAAAAA
ACAGCAAAACGAGGGCAATT

Downstream 100 bases:

>100_bases
TTCGTTAGTTTAGTTTAAAATAAGAAAACATAGGATAATAAGATATAGTGATAAAAATGTTTAAAACGATTGTAACTCCA
AGATTTGGAGATATTGATGG

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cro/CI Family Transcriptional Regulator; MerR Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Helix-Turn-Helix Domain Protein; HTH-Type Transcriptional Regulator; Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; Transcriptional Regulator Merr Family; Transcriptional Regulator Protein; Phosphate Butyryltransferase; Transcriptional Regulator-Like Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Epoxidase; Helix-Turn-Helix/Cupin Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Transcriptional Regulator; Helix-Turn-Helix Family Protein; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Xre Family; Transcription Regulator; XRE Family-Like Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Phosphotransbutyrylase

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTEKNQLGSKITQLRESKGMSIEDLAKASDSSIELIECLEKGNLVPSLTPLLKIARALSVRLGTFLDDAPQNGPVITKSG
NYESVVRFSGKLNGAVDSKLNFYSLAFEKQDRHMEPFLIDVYPFETNEYKLSSHEGEEFIFVISGEIEILYGSEKYLLKT
GDSIYYDSVVPHDLHAFGNSLAKILAVIYAPF

Sequences:

>Translated_192_residues
MTEKNQLGSKITQLRESKGMSIEDLAKASDSSIELIECLEKGNLVPSLTPLLKIARALSVRLGTFLDDAPQNGPVITKSG
NYESVVRFSGKLNGAVDSKLNFYSLAFEKQDRHMEPFLIDVYPFETNEYKLSSHEGEEFIFVISGEIEILYGSEKYLLKT
GDSIYYDSVVPHDLHAFGNSLAKILAVIYAPF
>Mature_191_residues
TEKNQLGSKITQLRESKGMSIEDLAKASDSSIELIECLEKGNLVPSLTPLLKIARALSVRLGTFLDDAPQNGPVITKSGN
YESVVRFSGKLNGAVDSKLNFYSLAFEKQDRHMEPFLIDVYPFETNEYKLSSHEGEEFIFVISGEIEILYGSEKYLLKTG
DSIYYDSVVPHDLHAFGNSLAKILAVIYAPF

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21378; Mature: 21246

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKNQLGSKITQLRESKGMSIEDLAKASDSSIELIECLEKGNLVPSLTPLLKIARALSV
CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLGTFLDDAPQNGPVITKSGNYESVVRFSGKLNGAVDSKLNFYSLAFEKQDRHMEPFLID
HHHHHHCCCCCCCCEEEECCCHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE
VYPFETNEYKLSSHEGEEFIFVISGEIEILYGSEKYLLKTGDSIYYDSVVPHDLHAFGNS
EEECCCCCEEECCCCCCEEEEEEECCEEEEECCCEEEEECCCEEEECCCCCHHHHHHHHH
LAKILAVIYAPF
HHHHHHHHHCCC
>Mature Secondary Structure 
TEKNQLGSKITQLRESKGMSIEDLAKASDSSIELIECLEKGNLVPSLTPLLKIARALSV
CCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLGTFLDDAPQNGPVITKSGNYESVVRFSGKLNGAVDSKLNFYSLAFEKQDRHMEPFLID
HHHHHHCCCCCCCCEEEECCCHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE
VYPFETNEYKLSSHEGEEFIFVISGEIEILYGSEKYLLKTGDSIYYDSVVPHDLHAFGNS
EEECCCCCEEECCCCCCEEEEEEECCEEEEECCCEEEEECCCEEEECCCCCHHHHHHHHH
LAKILAVIYAPF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA