Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150400172

Identifier: 150400172

GI number: 150400172

Start: 1459026

End: 1459307

Strand: Reverse

Name: 150400172

Synonym: Mevan_1431

Alternate gene names: NA

Gene position: 1459307-1459026 (Counterclockwise)

Preceding gene: 150400173

Following gene: 150400171

Centisome position: 84.84

GC content: 32.98

Gene sequence:

>282_bases
ATGGATTTTAGAATGCATAAAAACTGCATATGTAAAAAATTATTTGGTAATGCCAGATATTCCGGTACGGGAATAAGGCG
ACTTCTTAGAATGGTACTTAGCTCTGAAGAAATTGAACATGTAATTAAAAAGGAGACTGGATTAAAAGTACCTGAGGAAG
AATTAGATAAATTATCAAAAGAAATGCTTAAAGATGAAAAAATAATAGATGCGAGAAGAATGAATTCATTCAGGGGTTCT
GGATCCCAGTTCCGTGGCGGAAGAAAATTTGGAATACAATAA

Upstream 100 bases:

>100_bases
TATTTACTCACGTAAAAGCAAAGATTTTATATATTAGTTATCCAATAGAATAATTATGCACATATGTGCATAAATTATCA
TTGATGAAAAGGTTGATAAA

Downstream 100 bases:

>100_bases
TAAAAATTAACAAGGCGATAATTTGAAAATAGCAATACCTACAATTGAAAATAAAATCTGCTCGCACTTTGGTAAAACTC
CTTTTTTCACCATTTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MDFRMHKNCICKKLFGNARYSGTGIRRLLRMVLSSEEIEHVIKKETGLKVPEEELDKLSKEMLKDEKIIDARRMNSFRGS
GSQFRGGRKFGIQ

Sequences:

>Translated_93_residues
MDFRMHKNCICKKLFGNARYSGTGIRRLLRMVLSSEEIEHVIKKETGLKVPEEELDKLSKEMLKDEKIIDARRMNSFRGS
GSQFRGGRKFGIQ
>Mature_93_residues
MDFRMHKNCICKKLFGNARYSGTGIRRLLRMVLSSEEIEHVIKKETGLKVPEEELDKLSKEMLKDEKIIDARRMNSFRGS
GSQFRGGRKFGIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10806; Mature: 10806

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRMHKNCICKKLFGNARYSGTGIRRLLRMVLSSEEIEHVIKKETGLKVPEEELDKLSK
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EMLKDEKIIDARRMNSFRGSGSQFRGGRKFGIQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFRMHKNCICKKLFGNARYSGTGIRRLLRMVLSSEEIEHVIKKETGLKVPEEELDKLSK
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EMLKDEKIIDARRMNSFRGSGSQFRGGRKFGIQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA