| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150400090
Identifier: 150400090
GI number: 150400090
Start: 1374385
End: 1374819
Strand: Reverse
Name: 150400090
Synonym: Mevan_1348
Alternate gene names: NA
Gene position: 1374819-1374385 (Counterclockwise)
Preceding gene: 150400091
Following gene: 150400089
Centisome position: 79.93
GC content: 31.03
Gene sequence:
>435_bases ATGAAATCAAAAGTAATTGTCTTGTCAGAAGATGCAAAAACTTCACCTTCACGATTGTTTAGGTATTTAAACTCTTTAGA ATACGATATGAATGTAAAAGAAACTTGTTTTGGTGCATTTATTGAAGCAGACGATGAGGTCGTTGATAAAGTTGTTGAAC TTGTAAGGAACCTTGAAAAAAATAAAATATTCTGTAAAGATAGGGGATTTCCAATTTGGGATAAAAGAAGGTGTAGGGCA TTTAGGAAAGGTGGCCCAAGAGAAGGTTTTCACCAGCTAGAAGCGGAACAAAAAGTTTTAACAAGAATTTCAAGAGCTCT TTCTGCAATTGAAGTTGAAAAAATAGATGAGTTAGAACTAGAACGGCAATATGAAAAAATAAAGCCTAAAAAAATTGATG TATCTAAATTTAAAAAAATTATAAGCGAAATTTAA
Upstream 100 bases:
>100_bases TTAAATGGCTTAAACCCAAAAGACATAAGATATTATGTAGAAGAAAATTATGAAATCTGGTACTCTAACTTCATTAAATA GTTCAAATTTGGTGGTTTTT
Downstream 100 bases:
>100_bases TAACTGTATTGTGAAATTATGGTTCAAAAATACCAAAAAGGTTCCACTTTTGAACGGGAATTAAAGAAAAAACTTGAAAA AAAAGGTTTTGCAGTCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI
Sequences:
>Translated_144_residues MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI >Mature_144_residues MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI
Specific function: Unknown
COG id: COG4029
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012025 [H]
Pfam domain/function: PF09875 DUF2102 [H]
EC number: NA
Molecular weight: Translated: 16913; Mature: 16913
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEK CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NKIFCKDRGFPIWDKRRCRAFRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELEL CCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERQYEKIKPKKIDVSKFKKIISEI HHHHHHCCCCCCCHHHHHHHHHHC >Mature Secondary Structure MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEK CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NKIFCKDRGFPIWDKRRCRAFRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELEL CCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERQYEKIKPKKIDVSKFKKIISEI HHHHHHCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]