Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150400090

Identifier: 150400090

GI number: 150400090

Start: 1374385

End: 1374819

Strand: Reverse

Name: 150400090

Synonym: Mevan_1348

Alternate gene names: NA

Gene position: 1374819-1374385 (Counterclockwise)

Preceding gene: 150400091

Following gene: 150400089

Centisome position: 79.93

GC content: 31.03

Gene sequence:

>435_bases
ATGAAATCAAAAGTAATTGTCTTGTCAGAAGATGCAAAAACTTCACCTTCACGATTGTTTAGGTATTTAAACTCTTTAGA
ATACGATATGAATGTAAAAGAAACTTGTTTTGGTGCATTTATTGAAGCAGACGATGAGGTCGTTGATAAAGTTGTTGAAC
TTGTAAGGAACCTTGAAAAAAATAAAATATTCTGTAAAGATAGGGGATTTCCAATTTGGGATAAAAGAAGGTGTAGGGCA
TTTAGGAAAGGTGGCCCAAGAGAAGGTTTTCACCAGCTAGAAGCGGAACAAAAAGTTTTAACAAGAATTTCAAGAGCTCT
TTCTGCAATTGAAGTTGAAAAAATAGATGAGTTAGAACTAGAACGGCAATATGAAAAAATAAAGCCTAAAAAAATTGATG
TATCTAAATTTAAAAAAATTATAAGCGAAATTTAA

Upstream 100 bases:

>100_bases
TTAAATGGCTTAAACCCAAAAGACATAAGATATTATGTAGAAGAAAATTATGAAATCTGGTACTCTAACTTCATTAAATA
GTTCAAATTTGGTGGTTTTT

Downstream 100 bases:

>100_bases
TAACTGTATTGTGAAATTATGGTTCAAAAATACCAAAAAGGTTCCACTTTTGAACGGGAATTAAAGAAAAAACTTGAAAA
AAAAGGTTTTGCAGTCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA
FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI

Sequences:

>Translated_144_residues
MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA
FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI
>Mature_144_residues
MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEKNKIFCKDRGFPIWDKRRCRA
FRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELELERQYEKIKPKKIDVSKFKKIISEI

Specific function: Unknown

COG id: COG4029

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012025 [H]

Pfam domain/function: PF09875 DUF2102 [H]

EC number: NA

Molecular weight: Translated: 16913; Mature: 16913

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEK
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NKIFCKDRGFPIWDKRRCRAFRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELEL
CCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQYEKIKPKKIDVSKFKKIISEI
HHHHHHCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKSKVIVLSEDAKTSPSRLFRYLNSLEYDMNVKETCFGAFIEADDEVVDKVVELVRNLEK
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NKIFCKDRGFPIWDKRRCRAFRKGGPREGFHQLEAEQKVLTRISRALSAIEVEKIDELEL
CCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQYEKIKPKKIDVSKFKKIISEI
HHHHHHCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]