Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399980

Identifier: 150399980

GI number: 150399980

Start: 1269665

End: 1270417

Strand: Reverse

Name: 150399980

Synonym: Mevan_1238

Alternate gene names: NA

Gene position: 1270417-1269665 (Counterclockwise)

Preceding gene: 150399981

Following gene: 150399975

Centisome position: 73.86

GC content: 29.75

Gene sequence:

>753_bases
GTGATAGAACAAAAATTTATTGATAACGATAATATTTTAGAAGTAATAATTCAGGTGTTAGGACAAAATTCCGATGAAAA
AACAAAATTAAGTGGGTCTAAATTCTTTAAAGAACAAATTAAGCTTCACGGGGTAAAAGTTTCAACTGTCACAAAAATTA
GTAAAGAATATTTTGAATATATAAAAAACTGCGATAAAAATGAAATTTTATCCCTTTGTGAAACGCTCTTTTCATCAGGA
TACTTGGAAGAACAGTTTATTGCATGCAATTGGTCGTACTATTTGAAAAACCAGTATAGTATGGATGATTTTATCACTTT
TGAACGGCGGTTAAATCAGTATGTTACTAATTGGGCTTCTTGTGACACACCATGTAACCACACAATTGGAACATTTATTG
AAATGTATCCAAATTTTATACAAAATATAATAACTTGGACAAAATCAAATAACCGCTGGCTTCGAAGAGGGGCTGCAGTA
ACGCTCATAATTCCTGCCCGTAAAGGAAAATTTATTGATGAAATTTTTCAGATTGCAAATAACCTATTTAGCGATAAAGA
AGATTTGGTGCAAAAAGGGTACGGCTGGATGTTAAAAGCTGCAAGTGAATCTCATGAAAAAGAAGTTTTTGAATACGTGA
TAAAAAATAAATCAAATATGCCAAGAACTGCGCTTCGATATTCAATAGAAAAAATGTCAAAAGAATTAAAAGAAGAAGTT
GAAAAAATAAATTTATTATATATAAAAACTTAA

Upstream 100 bases:

>100_bases
TTTATTTCGTATACCTTTTTTTATTTTTTACCGAGATTTAAAAACCATGATTCTAAAACTTAATATATAAAATTTATAGG
TTGGAGGGGGTTGAAATAAA

Downstream 100 bases:

>100_bases
AACTTAGAAAAAAACGTAAAAAATATAATTTTAAAGCTTTTTCATTGCAATATCTATTGCATTCATTGTTTTTTCTAAAA
CAAAATCGTCGTGTTTTATT

Product: DNA alkylation repair enzyme

Products: NA

Alternate protein names: DNA Alkylation Repair Superfamily; DNA Alkylation Repair Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIEQKFIDNDNILEVIIQVLGQNSDEKTKLSGSKFFKEQIKLHGVKVSTVTKISKEYFEYIKNCDKNEILSLCETLFSSG
YLEEQFIACNWSYYLKNQYSMDDFITFERRLNQYVTNWASCDTPCNHTIGTFIEMYPNFIQNIITWTKSNNRWLRRGAAV
TLIIPARKGKFIDEIFQIANNLFSDKEDLVQKGYGWMLKAASESHEKEVFEYVIKNKSNMPRTALRYSIEKMSKELKEEV
EKINLLYIKT

Sequences:

>Translated_250_residues
MIEQKFIDNDNILEVIIQVLGQNSDEKTKLSGSKFFKEQIKLHGVKVSTVTKISKEYFEYIKNCDKNEILSLCETLFSSG
YLEEQFIACNWSYYLKNQYSMDDFITFERRLNQYVTNWASCDTPCNHTIGTFIEMYPNFIQNIITWTKSNNRWLRRGAAV
TLIIPARKGKFIDEIFQIANNLFSDKEDLVQKGYGWMLKAASESHEKEVFEYVIKNKSNMPRTALRYSIEKMSKELKEEV
EKINLLYIKT
>Mature_250_residues
MIEQKFIDNDNILEVIIQVLGQNSDEKTKLSGSKFFKEQIKLHGVKVSTVTKISKEYFEYIKNCDKNEILSLCETLFSSG
YLEEQFIACNWSYYLKNQYSMDDFITFERRLNQYVTNWASCDTPCNHTIGTFIEMYPNFIQNIITWTKSNNRWLRRGAAV
TLIIPARKGKFIDEIFQIANNLFSDKEDLVQKGYGWMLKAASESHEKEVFEYVIKNKSNMPRTALRYSIEKMSKELKEEV
EKINLLYIKT

Specific function: Unknown

COG id: COG4912

COG function: function code L; Predicted DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29428; Mature: 29428

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQKFIDNDNILEVIIQVLGQNSDEKTKLSGSKFFKEQIKLHGVKVSTVTKISKEYFEY
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKNCDKNEILSLCETLFSSGYLEEQFIACNWSYYLKNQYSMDDFITFERRLNQYVTNWAS
HHCCCHHHHHHHHHHHHHCCCCCHHHEEECHHHEECCCCCHHHHHHHHHHHHHHHHHHHC
CDTPCNHTIGTFIEMYPNFIQNIITWTKSNNRWLRRGAAVTLIIPARKGKFIDEIFQIAN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHH
NLFSDKEDLVQKGYGWMLKAASESHEKEVFEYVIKNKSNMPRTALRYSIEKMSKELKEEV
HHCCCHHHHHHCCCCCEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
EKINLLYIKT
HHHHEEEEEC
>Mature Secondary Structure
MIEQKFIDNDNILEVIIQVLGQNSDEKTKLSGSKFFKEQIKLHGVKVSTVTKISKEYFEY
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKNCDKNEILSLCETLFSSGYLEEQFIACNWSYYLKNQYSMDDFITFERRLNQYVTNWAS
HHCCCHHHHHHHHHHHHHCCCCCHHHEEECHHHEECCCCCHHHHHHHHHHHHHHHHHHHC
CDTPCNHTIGTFIEMYPNFIQNIITWTKSNNRWLRRGAAVTLIIPARKGKFIDEIFQIAN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHH
NLFSDKEDLVQKGYGWMLKAASESHEKEVFEYVIKNKSNMPRTALRYSIEKMSKELKEEV
HHCCCHHHHHHCCCCCEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
EKINLLYIKT
HHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA