Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399848

Identifier: 150399848

GI number: 150399848

Start: 1117442

End: 1118017

Strand: Reverse

Name: 150399848

Synonym: Mevan_1103

Alternate gene names: NA

Gene position: 1118017-1117442 (Counterclockwise)

Preceding gene: 150399849

Following gene: 150399847

Centisome position: 65.0

GC content: 33.68

Gene sequence:

>576_bases
ATGAGAGCGGGGCACGATAGAAATAAAAGAGAGTTTGAAGACTACGCATACGTTTTAGACTTCTTAGAATACGGCTACCC
TGAAGACACAAGGCCGCTTCATCAGAAAAAACCTATCACACTTGCATTCGGTGAAAAACAGTTTGTGATGATGGAATTAA
CACTTAAAGATGGTAAAACCGTTGAACTTGCCGAAAAATTATATATTGGAAAAGGTAAGCGTGAAAAAGTCGAATTTGTG
TCAAAAATGTTAAAATATGATAATTTAACCCCTACTGCAAAAACAGAACTGCTTTATGTCATAAAAGAAGCCGTTAAGTT
TCAAGAAGAAAGATTTATAGAATTTTTAAATAATTGTGGCCCACTTACCCCTAGAATGCATTCTTTACAGTTGCTTCCAG
GAATTGGGAAAACTTCAATGTGGAAGGTAATCGAGGAAAGGGAAGTAAGAAAGTTTGAAAATTTTAAGGATTTTGAAGAA
AGGGTTAGAAAAAATATAATTGACCCAATTGCAAAAAGAATTGAAGAAGAAATCAAACAAGACCAAAAACACTACTTATT
TGTAAAGTGGAAATAA

Upstream 100 bases:

>100_bases
CGCATTTTTACTATTTTGTTACTAAAACATTAATTTTTTATTAAATTAAGTCTATATTGATATATGATATTATAACTTAA
TACCGAAAAAAGGTGTATTT

Downstream 100 bases:

>100_bases
TTAATTTTTATTTTTGGTGTTATCTTGAAAATATTAATCCCTTCAATATATCATCCTTTTTTAGGCGGAATAACCGTACA
CGTTGAAAATTTAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV
SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE
RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK

Sequences:

>Translated_191_residues
MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV
SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE
RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK
>Mature_191_residues
MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV
SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE
RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK

Specific function: Unknown

COG id: COG1491

COG function: function code J; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007003
- InterPro:   IPR012340 [H]

Pfam domain/function: PF04919 DUF655 [H]

EC number: NA

Molecular weight: Translated: 22899; Mature: 22899

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCEEEEEEEEECCCCH
VELAEKLYIGKGKREKVEFVSKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEERVRKNIIDPIAKRIEEEIKQ
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
DQKHYLFVKWK
CCCCEEEEEEC
>Mature Secondary Structure
MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCEEEEEEEEECCCCH
VELAEKLYIGKGKREKVEFVSKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEERVRKNIIDPIAKRIEEEIKQ
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
DQKHYLFVKWK
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]