| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399848
Identifier: 150399848
GI number: 150399848
Start: 1117442
End: 1118017
Strand: Reverse
Name: 150399848
Synonym: Mevan_1103
Alternate gene names: NA
Gene position: 1118017-1117442 (Counterclockwise)
Preceding gene: 150399849
Following gene: 150399847
Centisome position: 65.0
GC content: 33.68
Gene sequence:
>576_bases ATGAGAGCGGGGCACGATAGAAATAAAAGAGAGTTTGAAGACTACGCATACGTTTTAGACTTCTTAGAATACGGCTACCC TGAAGACACAAGGCCGCTTCATCAGAAAAAACCTATCACACTTGCATTCGGTGAAAAACAGTTTGTGATGATGGAATTAA CACTTAAAGATGGTAAAACCGTTGAACTTGCCGAAAAATTATATATTGGAAAAGGTAAGCGTGAAAAAGTCGAATTTGTG TCAAAAATGTTAAAATATGATAATTTAACCCCTACTGCAAAAACAGAACTGCTTTATGTCATAAAAGAAGCCGTTAAGTT TCAAGAAGAAAGATTTATAGAATTTTTAAATAATTGTGGCCCACTTACCCCTAGAATGCATTCTTTACAGTTGCTTCCAG GAATTGGGAAAACTTCAATGTGGAAGGTAATCGAGGAAAGGGAAGTAAGAAAGTTTGAAAATTTTAAGGATTTTGAAGAA AGGGTTAGAAAAAATATAATTGACCCAATTGCAAAAAGAATTGAAGAAGAAATCAAACAAGACCAAAAACACTACTTATT TGTAAAGTGGAAATAA
Upstream 100 bases:
>100_bases CGCATTTTTACTATTTTGTTACTAAAACATTAATTTTTTATTAAATTAAGTCTATATTGATATATGATATTATAACTTAA TACCGAAAAAAGGTGTATTT
Downstream 100 bases:
>100_bases TTAATTTTTATTTTTGGTGTTATCTTGAAAATATTAATCCCTTCAATATATCATCCTTTTTTAGGCGGAATAACCGTACA CGTTGAAAATTTAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK
Sequences:
>Translated_191_residues MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK >Mature_191_residues MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKTVELAEKLYIGKGKREKVEFV SKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCGPLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEE RVRKNIIDPIAKRIEEEIKQDQKHYLFVKWK
Specific function: Unknown
COG id: COG1491
COG function: function code J; Predicted RNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007003 - InterPro: IPR012340 [H]
Pfam domain/function: PF04919 DUF655 [H]
EC number: NA
Molecular weight: Translated: 22899; Mature: 22899
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCEEEEEEEEECCCCH VELAEKLYIGKGKREKVEFVSKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCG HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEERVRKNIIDPIAKRIEEEIKQ CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH DQKHYLFVKWK CCCCEEEEEEC >Mature Secondary Structure MRAGHDRNKREFEDYAYVLDFLEYGYPEDTRPLHQKKPITLAFGEKQFVMMELTLKDGKT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCEEEEEEEEECCCCH VELAEKLYIGKGKREKVEFVSKMLKYDNLTPTAKTELLYVIKEAVKFQEERFIEFLNNCG HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLTPRMHSLQLLPGIGKTSMWKVIEEREVRKFENFKDFEERVRKNIIDPIAKRIEEEIKQ CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH DQKHYLFVKWK CCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]