Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399793

Identifier: 150399793

GI number: 150399793

Start: 1066552

End: 1067148

Strand: Reverse

Name: 150399793

Synonym: Mevan_1047

Alternate gene names: NA

Gene position: 1067148-1066552 (Counterclockwise)

Preceding gene: 150399794

Following gene: 150399792

Centisome position: 62.04

GC content: 29.82

Gene sequence:

>597_bases
ATGGATATGTCTGCATCAATATCCAGAATTTATAATTATTTAATTAAAAGAAACCTACGGATACTTAAAAAAACCGGTAA
AAATGTAGATGAAAGAATATTTATTGGATTAATTTTTGTAGTACTGGTTTTACCAATATTACTTAGGATAATAATTGGTT
TTACACTACAAACTACCATCATATTAACTCTTGTTTATTTAGGGAGTGTACTTGCAATTCCAAGTATAATGTATGAGTCA
AAAATGGAAAAGTTTGATAGCAACCTTCCAAAAGCACTTTATGTAATGGTTCTATCATTGGATTCAGGTAGGTCAATTGT
TGAAGCAATTAATGAAGTTATACGAAGTGGAATTCCTGAAGTAGATTCTGTATTTTCAAAAATAGTGCTGTTAATGACTG
AAAAAAAGCTTAGTTTTGAAGATTCGATGATGCTTGTATCAAATTCACTTGATTCAAAACTTTTTAGACAAATTAGCAGG
TTGATAATTGAAAATAGAAAATACGGCGGAGAACTTGCAAATACGTTAAATATGTATCGATTAGGTCAGGTTTTAAAATT
CCTGCCCTTTGAGAACCTACTCCCATACCTAAATTAA

Upstream 100 bases:

>100_bases
GATGGAATTATTAATGCTATTGACTTAGTAATGACTAAAATAGGGCTTTTATCTACCATAATTTTTACAATATTTATTAA
AATGAAAATAGAGTGAAAAA

Downstream 100 bases:

>100_bases
GTTCTTCAATAGCTACTGCAATATTTTTATTAACATCTTTTGCCTTAGGGTGTCCACCCGTTATTGCAGCAATAATTATT
GGAGCATCTAACTTTTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLNMYRLGQVLKFLPFENLLPYLN

Sequences:

>Translated_198_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLNMYRLGQVLKFLPFENLLPYLN
>Mature_198_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLNMYRLGQVLKFLPFENLLPYLN

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 22603; Mature: 22603

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLNMYR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGQVLKFLPFENLLPYLN
HHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLNMYR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGQVLKFLPFENLLPYLN
HHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]