| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399663
Identifier: 150399663
GI number: 150399663
Start: 932357
End: 933139
Strand: Reverse
Name: 150399663
Synonym: Mevan_0913
Alternate gene names: NA
Gene position: 933139-932357 (Counterclockwise)
Preceding gene: 150399665
Following gene: 150399662
Centisome position: 54.25
GC content: 32.31
Gene sequence:
>783_bases ATGGAATTAAAATTATCGGTACCCCAATGGCACTATAGTATGCTTTTAGACGATGAAAGAGTTTCAGTATTTAAAGAAGC GATTGAAACAAGCGTAAAGAAAGGAGATACGGTATTTGACCTTGGAACTGGAAGCGGCATTTTGGCAATGGTTGCAGCAA AGGATGCTAAAAAAGTATATGCAGTAGAACTTGACCCGATAACTACAGAATATACAAAGAGAAATATTACTACGAATAAT TTTGAAAATATTATTGTTATTGAAAGCGATGCTACATACTATCCATTTAAAGAAAAGGCAGATTTGGTAATTGCCGAACT TTTGGATACAGGATTAATTACCGAACCGCAAGTTCCGGTTTTAAATTCAATTATAAAACGAGGACTTTTAAAAGAAGGCG GAATTATAATTCCAAAGGAAGTTTATAATACTGCACAGATAGTAGCGGCTAAAATGAACCATATTTACTATGACGAGGAA GTAACGTCAGAAAAAGCTTCGAATGAGGTACTTTACGATACAATAAATTTTTACAAGGTAAATGATGAAAAGGTTGAATA TATTCTAAAATTTGAAATACCAAATGATGTAAAAAAGCCTGCAATAAGGTTAAATACATACACTTTGCTAAAAGATGGAT TAATTTCAGGCTCTAGCCCCATGCTAAATCCACCCCTTGTAATTCCTATAAAAAATAATTTAAATGCGGGAACTGTAAAA ATAAAACTTTCCTATAAAATGGGCGGGGATTTAGAATCAATAAAAGTTCAAGTTTTAAAATAA
Upstream 100 bases:
>100_bases TATATTTATACTAAAAAGTAATAGTTAGTCTGATTTTAAAAGTATTTTTATTCATTGGTAGTTTAAAAATTTATAATATA ATGTAGTTGAGGCAAAATTT
Downstream 100 bases:
>100_bases GTGAAAAAATGAAAGTAGGAATTCTTGCGCATAAAAAAACTCCAGAAAACTTGATGATTTACGAGGAATTTTTAAAAAAT AATGTTTCAATCGAATTTAT
Product: methyltransferase small
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MELKLSVPQWHYSMLLDDERVSVFKEAIETSVKKGDTVFDLGTGSGILAMVAAKDAKKVYAVELDPITTEYTKRNITTNN FENIIVIESDATYYPFKEKADLVIAELLDTGLITEPQVPVLNSIIKRGLLKEGGIIIPKEVYNTAQIVAAKMNHIYYDEE VTSEKASNEVLYDTINFYKVNDEKVEYILKFEIPNDVKKPAIRLNTYTLLKDGLISGSSPMLNPPLVIPIKNNLNAGTVK IKLSYKMGGDLESIKVQVLK
Sequences:
>Translated_260_residues MELKLSVPQWHYSMLLDDERVSVFKEAIETSVKKGDTVFDLGTGSGILAMVAAKDAKKVYAVELDPITTEYTKRNITTNN FENIIVIESDATYYPFKEKADLVIAELLDTGLITEPQVPVLNSIIKRGLLKEGGIIIPKEVYNTAQIVAAKMNHIYYDEE VTSEKASNEVLYDTINFYKVNDEKVEYILKFEIPNDVKKPAIRLNTYTLLKDGLISGSSPMLNPPLVIPIKNNLNAGTVK IKLSYKMGGDLESIKVQVLK >Mature_260_residues MELKLSVPQWHYSMLLDDERVSVFKEAIETSVKKGDTVFDLGTGSGILAMVAAKDAKKVYAVELDPITTEYTKRNITTNN FENIIVIESDATYYPFKEKADLVIAELLDTGLITEPQVPVLNSIIKRGLLKEGGIIIPKEVYNTAQIVAAKMNHIYYDEE VTSEKASNEVLYDTINFYKVNDEKVEYILKFEIPNDVKKPAIRLNTYTLLKDGLISGSSPMLNPPLVIPIKNNLNAGTVK IKLSYKMGGDLESIKVQVLK
Specific function: Unknown
COG id: COG4076
COG function: function code R; Predicted RNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH738 [H]
Homologues:
Organism=Caenorhabditis elegans, GI115532940, Length=110, Percent_Identity=35.4545454545455, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR021172 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: NA
Molecular weight: Translated: 29094; Mature: 29094
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKLSVPQWHYSMLLDDERVSVFKEAIETSVKKGDTVFDLGTGSGILAMVAAKDAKKVY CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEE AVELDPITTEYTKRNITTNNFENIIVIESDATYYPFKEKADLVIAELLDTGLITEPQVPV EEEECCCCHHHHHCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHCCCCCCCCCHH LNSIIKRGLLKEGGIIIPKEVYNTAQIVAAKMNHIYYDEEVTSEKASNEVLYDTINFYKV HHHHHHHCCHHCCCEEECHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCEEEEEEEEEEE NDEKVEYILKFEIPNDVKKPAIRLNTYTLLKDGLISGSSPMLNPPLVIPIKNNLNAGTVK CCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEE IKLSYKMGGDLESIKVQVLK EEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MELKLSVPQWHYSMLLDDERVSVFKEAIETSVKKGDTVFDLGTGSGILAMVAAKDAKKVY CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEE AVELDPITTEYTKRNITTNNFENIIVIESDATYYPFKEKADLVIAELLDTGLITEPQVPV EEEECCCCHHHHHCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHCCCCCCCCCHH LNSIIKRGLLKEGGIIIPKEVYNTAQIVAAKMNHIYYDEEVTSEKASNEVLYDTINFYKV HHHHHHHCCHHCCCEEECHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCEEEEEEEEEEE NDEKVEYILKFEIPNDVKKPAIRLNTYTLLKDGLISGSSPMLNPPLVIPIKNNLNAGTVK CCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEE IKLSYKMGGDLESIKVQVLK EEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]