Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399657

Identifier: 150399657

GI number: 150399657

Start: 927355

End: 928974

Strand: Reverse

Name: 150399657

Synonym: Mevan_0907

Alternate gene names: NA

Gene position: 928974-927355 (Counterclockwise)

Preceding gene: 150399658

Following gene: 150399656

Centisome position: 54.01

GC content: 30.74

Gene sequence:

>1620_bases
ATGTTAGAACCTGTATGCTATGATATTGGACGAATATGCAAGGAAAAAAGCGATACTTCATTAAAAGAATTAACGCCAAA
AGTAATTGACGTTGACTTTAAAATGCCCTTTACATTAAAAGTTCCATTTGATTGTCCAAAAGAAATTTCAGAAGAACTAG
TTAATTTAAACCATAAAAATTTTATTTTTGAAAAAGACGGAATAAAATTTCAAATAATTAATTGTGGAAAATATTTTGAA
TTAATGGATATTGAAAAAAATATTGATATCTACATAGTTTCAGATATTACAAGAATGATAAAACGAAAAGAAATTCTTGA
AATAATTCCTAAGTTACGAAAAGAGGTTTCTCCAAACTCTGGAATATGTGTTCCAGGAGCATTGCCTTTTGAAATACCGT
TACTTGTTTATATGGGGGTAGACTATTTTGACTACACTTCTGCAACTTATTATGCTTCTTTAGGGTATAAATTTAGTAAA
AACCGGTTAATAAATTCAAATGAAGATTTTGAAATTTTGAAAAAATATAACGAGTCAATAATCGCCCAAGTACTAGATGA
AGTAAAATTTTGTATTGAAGAAGGATCACTTAGAAACCTTGTTGTTGAAACAACTATTTCTGACCCATATTTACGGTCAA
ACTACCGGAGGTTTAAGCCTGAACTTACAAACATGCCCATTTCAAAAGTTAATAAAATTATTGTTACGATTGATGAGACT
AAAATTCCTGAAGTCCAAAAATATATCGAAAGAGCCGAAAATTATGAACCTTACTCAAATGTGATAGTTTTATTGCCTTG
TTCGTCTAAAAAGCCGTATTCTTATTCAAAAAGTCACCAACTATTTATAAATTCGATAAATACGGTAAAAATGCCTGTAG
AGGAACTAGTACTTACATCACCTTACGGCATAGTGCCCAGATCTCTTGAACGTACCGTGGATTATGACATTCCAGTAACT
GGAGAATGGAGTTTTGAAGAAATGGAGTTTATAAATAAACACTTGAAAAACTACATAAAAACCGCAAAATCTAAATTTGA
AGAAGTAAAGATAATAGCACATCTTCCAAAACATTATCTTGAAATTTTAGATATTGAAGATGAAATGATAATAACTTCTG
ATGGGAACCCTACTTCAGATACATCATTAAGTAATTTGAGGAAAGTTTTAAAAGAACTCGATGAACGTTTTAATTTAAAC
CTTTCAAGGCATGAACAAAGGATTCATAATTACAAAGAACTTGCAAAATTCCAGTTTGGAAAGAACTTTTTACCAAACAA
CGTGACTATAAAAGGAAGGCACGTGAAATTTTTCATAAAAGAGGGAAATAAAATAACCCAATTAGCCTCAATAAATGAAA
ATAATGGTCTATTCGTTCTAACTTCTCAAGGGGGGGAACTTTTAGGTAAACAACGATGGGTAGAAGTCAATTTCGATGTT
AAAAAAGGCTCACTTTTTGCGCCAGGATTTAAAGATGCAGATGATTCGATTTCAGTAAATGATGAAGTTGTTATTTTAAA
AGACAACAAAGTTTTAGGAGTTGGGAGGGCATTAATGAGTGGAAGCGAAATGAAAAAGGCAAAACATGGAGTTTTGGTAA
ATATAAGGCATGTTATTTAA

Upstream 100 bases:

>100_bases
ACTTAATATAGTATAATCAGCGAATAGATATTCAAAAGTAAAAAATTTAGATTTAAAACTTGATTATATTAAAACTTGAT
TTTAATTTTAAGGTGTATTT

Downstream 100 bases:

>100_bases
ATTTAGAATGTACTATTCATGTGCCCTTAATTAAAAATTGCAGTAGCAATATTTCGTTATATCGAGAGGTCATGAAAAAA
TGGCAGAGTCTAATAAAAAA

Product: PUA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE
LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK
NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET
KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT
GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN
LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV
KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI

Sequences:

>Translated_539_residues
MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE
LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK
NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET
KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT
GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN
LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV
KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI
>Mature_539_residues
MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE
LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK
NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET
KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT
GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN
LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV
KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI

Specific function: Unknown

COG id: COG1549

COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616 [H]

Pfam domain/function: PF01472 PUA; PF01702 TGT [H]

EC number: NA

Molecular weight: Translated: 62094; Mature: 62094

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKN
CCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCC
FIFEKDGIKFQIINCGKYFELMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNS
EEEECCCCEEEEEECCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
GICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSKNRLINSNEDFEILKKYNESI
CEEECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHH
IAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET
HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCHHHCCEEEEEECCC
KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTS
CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCHHHHHEEC
PYGIVPRSLERTVDYDIPVTGEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYL
CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLNLSRHEQRIHNYKELAKFQFG
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
KNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV
CCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCHHCCCCEEEEEEEEE
KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI
CCCCEECCCCCCCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHCCEEEEEEECC
>Mature Secondary Structure
MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKN
CCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCC
FIFEKDGIKFQIINCGKYFELMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNS
EEEECCCCEEEEEECCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
GICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSKNRLINSNEDFEILKKYNESI
CEEECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHH
IAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET
HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCHHHCCEEEEEECCC
KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTS
CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCHHHHHEEC
PYGIVPRSLERTVDYDIPVTGEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYL
CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLNLSRHEQRIHNYKELAKFQFG
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
KNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV
CCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCHHCCCCEEEEEEEEE
KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI
CCCCEECCCCCCCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]