| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399657
Identifier: 150399657
GI number: 150399657
Start: 927355
End: 928974
Strand: Reverse
Name: 150399657
Synonym: Mevan_0907
Alternate gene names: NA
Gene position: 928974-927355 (Counterclockwise)
Preceding gene: 150399658
Following gene: 150399656
Centisome position: 54.01
GC content: 30.74
Gene sequence:
>1620_bases ATGTTAGAACCTGTATGCTATGATATTGGACGAATATGCAAGGAAAAAAGCGATACTTCATTAAAAGAATTAACGCCAAA AGTAATTGACGTTGACTTTAAAATGCCCTTTACATTAAAAGTTCCATTTGATTGTCCAAAAGAAATTTCAGAAGAACTAG TTAATTTAAACCATAAAAATTTTATTTTTGAAAAAGACGGAATAAAATTTCAAATAATTAATTGTGGAAAATATTTTGAA TTAATGGATATTGAAAAAAATATTGATATCTACATAGTTTCAGATATTACAAGAATGATAAAACGAAAAGAAATTCTTGA AATAATTCCTAAGTTACGAAAAGAGGTTTCTCCAAACTCTGGAATATGTGTTCCAGGAGCATTGCCTTTTGAAATACCGT TACTTGTTTATATGGGGGTAGACTATTTTGACTACACTTCTGCAACTTATTATGCTTCTTTAGGGTATAAATTTAGTAAA AACCGGTTAATAAATTCAAATGAAGATTTTGAAATTTTGAAAAAATATAACGAGTCAATAATCGCCCAAGTACTAGATGA AGTAAAATTTTGTATTGAAGAAGGATCACTTAGAAACCTTGTTGTTGAAACAACTATTTCTGACCCATATTTACGGTCAA ACTACCGGAGGTTTAAGCCTGAACTTACAAACATGCCCATTTCAAAAGTTAATAAAATTATTGTTACGATTGATGAGACT AAAATTCCTGAAGTCCAAAAATATATCGAAAGAGCCGAAAATTATGAACCTTACTCAAATGTGATAGTTTTATTGCCTTG TTCGTCTAAAAAGCCGTATTCTTATTCAAAAAGTCACCAACTATTTATAAATTCGATAAATACGGTAAAAATGCCTGTAG AGGAACTAGTACTTACATCACCTTACGGCATAGTGCCCAGATCTCTTGAACGTACCGTGGATTATGACATTCCAGTAACT GGAGAATGGAGTTTTGAAGAAATGGAGTTTATAAATAAACACTTGAAAAACTACATAAAAACCGCAAAATCTAAATTTGA AGAAGTAAAGATAATAGCACATCTTCCAAAACATTATCTTGAAATTTTAGATATTGAAGATGAAATGATAATAACTTCTG ATGGGAACCCTACTTCAGATACATCATTAAGTAATTTGAGGAAAGTTTTAAAAGAACTCGATGAACGTTTTAATTTAAAC CTTTCAAGGCATGAACAAAGGATTCATAATTACAAAGAACTTGCAAAATTCCAGTTTGGAAAGAACTTTTTACCAAACAA CGTGACTATAAAAGGAAGGCACGTGAAATTTTTCATAAAAGAGGGAAATAAAATAACCCAATTAGCCTCAATAAATGAAA ATAATGGTCTATTCGTTCTAACTTCTCAAGGGGGGGAACTTTTAGGTAAACAACGATGGGTAGAAGTCAATTTCGATGTT AAAAAAGGCTCACTTTTTGCGCCAGGATTTAAAGATGCAGATGATTCGATTTCAGTAAATGATGAAGTTGTTATTTTAAA AGACAACAAAGTTTTAGGAGTTGGGAGGGCATTAATGAGTGGAAGCGAAATGAAAAAGGCAAAACATGGAGTTTTGGTAA ATATAAGGCATGTTATTTAA
Upstream 100 bases:
>100_bases ACTTAATATAGTATAATCAGCGAATAGATATTCAAAAGTAAAAAATTTAGATTTAAAACTTGATTATATTAAAACTTGAT TTTAATTTTAAGGTGTATTT
Downstream 100 bases:
>100_bases ATTTAGAATGTACTATTCATGTGCCCTTAATTAAAAATTGCAGTAGCAATATTTCGTTATATCGAGAGGTCATGAAAAAA TGGCAGAGTCTAATAAAAAA
Product: PUA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI
Sequences:
>Translated_539_residues MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI >Mature_539_residues MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKNFIFEKDGIKFQIINCGKYFE LMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNSGICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSK NRLINSNEDFEILKKYNESIIAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTSPYGIVPRSLERTVDYDIPVT GEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYLEILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLN LSRHEQRIHNYKELAKFQFGKNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI
Specific function: Unknown
COG id: COG1549
COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR002616 [H]
Pfam domain/function: PF01472 PUA; PF01702 TGT [H]
EC number: NA
Molecular weight: Translated: 62094; Mature: 62094
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKN CCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCC FIFEKDGIKFQIINCGKYFELMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNS EEEECCCCEEEEEECCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC GICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSKNRLINSNEDFEILKKYNESI CEEECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHH IAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCHHHCCEEEEEECCC KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTS CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCHHHHHEEC PYGIVPRSLERTVDYDIPVTGEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYL CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLNLSRHEQRIHNYKELAKFQFG HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV CCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCHHCCCCEEEEEEEEE KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI CCCCEECCCCCCCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHCCEEEEEEECC >Mature Secondary Structure MLEPVCYDIGRICKEKSDTSLKELTPKVIDVDFKMPFTLKVPFDCPKEISEELVNLNHKN CCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCC FIFEKDGIKFQIINCGKYFELMDIEKNIDIYIVSDITRMIKRKEILEIIPKLRKEVSPNS EEEECCCCEEEEEECCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC GICVPGALPFEIPLLVYMGVDYFDYTSATYYASLGYKFSKNRLINSNEDFEILKKYNESI CEEECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHH IAQVLDEVKFCIEEGSLRNLVVETTISDPYLRSNYRRFKPELTNMPISKVNKIIVTIDET HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCHHHCCEEEEEECCC KIPEVQKYIERAENYEPYSNVIVLLPCSSKKPYSYSKSHQLFINSINTVKMPVEELVLTS CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCHHHHHEEC PYGIVPRSLERTVDYDIPVTGEWSFEEMEFINKHLKNYIKTAKSKFEEVKIIAHLPKHYL CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EILDIEDEMIITSDGNPTSDTSLSNLRKVLKELDERFNLNLSRHEQRIHNYKELAKFQFG HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KNFLPNNVTIKGRHVKFFIKEGNKITQLASINENNGLFVLTSQGGELLGKQRWVEVNFDV CCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCHHCCCCEEEEEEEEE KKGSLFAPGFKDADDSISVNDEVVILKDNKVLGVGRALMSGSEMKKAKHGVLVNIRHVI CCCCEECCCCCCCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]