| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is yhcC [C]
Identifier: 150399639
GI number: 150399639
Start: 909145
End: 910770
Strand: Reverse
Name: yhcC [C]
Synonym: Mevan_0889
Alternate gene names: 150399639
Gene position: 910770-909145 (Counterclockwise)
Preceding gene: 150399642
Following gene: 150399637
Centisome position: 52.95
GC content: 34.56
Gene sequence:
>1626_bases TTGAGTGAATATTCTAAATTTATACGATGCATTATCATAAATTTACTCGCTGAAAAGGAAAAAATACGTGGACTTGATCC AAAACGGAAAAAACAGAAAGTTGAGGACATCAAAGCAAAATGTTTAAGAAAACATGGTCTAAATACTGGTTTTCCCCCAA ATTCTGACGTGATAGCCCACGCAACCGAAGAAGAAAAAACAGAAATAGTTCCAATACTTAGAAAAAAGCCTATACGAACT CTTTCTGGTGTTTCAGTAGTTGCAGTCATGACCTCCCCTGAACCGTGTCCCCATGGAAAATGTTCATTCTGCCCCGGTGG AAAAGAAAGTAATTTTGGAAATGTCCCCCAAAGTTATACTGGAAAAGAGCCTGCAACAATGCGGGGAATTATGTATGACT TTAATCCGTATATACAGACCGTTGAACGATTAAAACAGCTTGAAAAAGTTGGACACCCTACAGACAAGGTAGAATTGATT ATAATGGGGGGAACGTTTCCTGCAAGGGATGTAGGATATCAAGAAAGCTTTATAAAAGGATGTCTCGATGCAATGAATGG GGAAATTTCAAACAGCCTAAACGAAGCAAAATTAAAAAATGAAAGTGCAAAACACAGATGTGTTGCATTAACAATTGAAA CAAGGCCAGATTACTGTGGGGAAAAAGAAATAAACCAAATGCTTAATTTAGGAGCCACACGTGTTGAACTTGGAATTCAA AGTACTTATGGCGAAGTTTTGGACTTTGTAAAACGTGGGCATGATATAGATGCTTCAATCAATGCTACAAGGCTTTTAAA AGATAGCGGCCTTAAAGTTTCATACCATATTATTCCAGGGCTACCAAATACGACTTTTGAAATGGATAAAAAAATGATTG AAACTATCTTTGAAGATAATAGATATAAGCCAGATTTAATTAAATTTTACCCGTGTTTAGTAATTCCTGGAACAGAAATT TATGATTTGTGGAAACAGGGAAAATTTAGTCCCATGAATGATGAAAAAGCAATAGAATTGATAGTTTATGGAAAATCAAT AATGCCAAAATGGATAAGAACTTCAAGAATTCAAAGAGACATTCCTGCAACAGTTATAAACGAAGGGGTAAGGAAAAGTA ATTTAGGAGAACTCGTATACAATAGGCTTGAAGAGCTAGGCATAAAGTGCAAATGTATACGTTGTAGGGAAGTTGGGCAT GTTGGCTATAAAAAGGGAATATTTCCTGAAATTGAAAATATTAAGTTATATCGGACTGACTATGATGCAAATTTTGGAAA AGAAGTATTTTTATCATTTGAAGATTTGAAAAATGATCTTTTAATAGGATACTTAAGGCTTAGAATTCCCTCAAAACCGT TTAGGCCGGAAATAACAGATAATACTTCAATTATACGACAGGTTCATGTATGCGGTCAACAAAAAGAACTTGATGCAAGT TCAATTGAATCTTCATGGCAACACAAAGGATATGGCCGGCTTTTAATTGAGGAAGCTGAAAAAATTTCAAAAGAAGAATT TGGTAAAAATCAAATATTGATTAACAGCGGAATAGGGGTTATTGAGTACTACAAAAAACTAGGATATAAAAAAGTTGGCC CATACATGGGAAAAATTCTTAAATAA
Upstream 100 bases:
>100_bases AATTGAAAAATATTAGGAAATACTTTAAAAGAACTATTAAATAAATATTATTCTGTTTTTATATATCAATTATTGTCTTT AAGAAGACAGGTGATTATTT
Downstream 100 bases:
>100_bases TTTTTATTTTTAATCGGCGAACATTATAATACCAAAGATGCCAAGATAACTGCATCAAATGCGTATGCCAAATATTTAAT AAAATTATTTCCCCTATAGG
Product: ELP3 family histone acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSEYSKFIRCIIINLLAEKEKIRGLDPKRKKQKVEDIKAKCLRKHGLNTGFPPNSDVIAHATEEEKTEIVPILRKKPIRT LSGVSVVAVMTSPEPCPHGKCSFCPGGKESNFGNVPQSYTGKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTDKVELI IMGGTFPARDVGYQESFIKGCLDAMNGEISNSLNEAKLKNESAKHRCVALTIETRPDYCGEKEINQMLNLGATRVELGIQ STYGEVLDFVKRGHDIDASINATRLLKDSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDNRYKPDLIKFYPCLVIPGTEI YDLWKQGKFSPMNDEKAIELIVYGKSIMPKWIRTSRIQRDIPATVINEGVRKSNLGELVYNRLEELGIKCKCIRCREVGH VGYKKGIFPEIENIKLYRTDYDANFGKEVFLSFEDLKNDLLIGYLRLRIPSKPFRPEITDNTSIIRQVHVCGQQKELDAS SIESSWQHKGYGRLLIEEAEKISKEEFGKNQILINSGIGVIEYYKKLGYKKVGPYMGKILK
Sequences:
>Translated_541_residues MSEYSKFIRCIIINLLAEKEKIRGLDPKRKKQKVEDIKAKCLRKHGLNTGFPPNSDVIAHATEEEKTEIVPILRKKPIRT LSGVSVVAVMTSPEPCPHGKCSFCPGGKESNFGNVPQSYTGKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTDKVELI IMGGTFPARDVGYQESFIKGCLDAMNGEISNSLNEAKLKNESAKHRCVALTIETRPDYCGEKEINQMLNLGATRVELGIQ STYGEVLDFVKRGHDIDASINATRLLKDSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDNRYKPDLIKFYPCLVIPGTEI YDLWKQGKFSPMNDEKAIELIVYGKSIMPKWIRTSRIQRDIPATVINEGVRKSNLGELVYNRLEELGIKCKCIRCREVGH VGYKKGIFPEIENIKLYRTDYDANFGKEVFLSFEDLKNDLLIGYLRLRIPSKPFRPEITDNTSIIRQVHVCGQQKELDAS SIESSWQHKGYGRLLIEEAEKISKEEFGKNQILINSGIGVIEYYKKLGYKKVGPYMGKILK >Mature_540_residues SEYSKFIRCIIINLLAEKEKIRGLDPKRKKQKVEDIKAKCLRKHGLNTGFPPNSDVIAHATEEEKTEIVPILRKKPIRTL SGVSVVAVMTSPEPCPHGKCSFCPGGKESNFGNVPQSYTGKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTDKVELII MGGTFPARDVGYQESFIKGCLDAMNGEISNSLNEAKLKNESAKHRCVALTIETRPDYCGEKEINQMLNLGATRVELGIQS TYGEVLDFVKRGHDIDASINATRLLKDSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDNRYKPDLIKFYPCLVIPGTEIY DLWKQGKFSPMNDEKAIELIVYGKSIMPKWIRTSRIQRDIPATVINEGVRKSNLGELVYNRLEELGIKCKCIRCREVGHV GYKKGIFPEIENIKLYRTDYDANFGKEVFLSFEDLKNDLLIGYLRLRIPSKPFRPEITDNTSIIRQVHVCGQQKELDASS IESSWQHKGYGRLLIEEAEKISKEEFGKNQILINSGIGVIEYYKKLGYKKVGPYMGKILK
Specific function: Unknown
COG id: COG1243
COG function: function code KB; Histone acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI23510283, Length=511, Percent_Identity=43.0528375733855, Blast_Score=413, Evalue=1e-115, Organism=Caenorhabditis elegans, GI133955098, Length=525, Percent_Identity=43.8095238095238, Blast_Score=428, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6325171, Length=495, Percent_Identity=42.4242424242424, Blast_Score=402, Evalue=1e-113, Organism=Drosophila melanogaster, GI19920684, Length=516, Percent_Identity=41.6666666666667, Blast_Score=403, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006638 - InterPro: IPR005910 - InterPro: IPR007197 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 61431; Mature: 61300
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYSKFIRCIIINLLAEKEKIRGLDPKRKKQKVEDIKAKCLRKHGLNTGFPPNSDVIAH CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE ATEEEKTEIVPILRKKPIRTLSGVSVVAVMTSPEPCPHGKCSFCPGGKESNFGNVPQSYT CCCHHCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTDKVELIIMGGTFPARDVGYQESFIKG CCCCCHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH CLDAMNGEISNSLNEAKLKNESAKHRCVALTIETRPDYCGEKEINQMLNLGATRVELGIQ HHHHHCCHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECHH STYGEVLDFVKRGHDIDASINATRLLKDSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDN HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC RYKPDLIKFYPCLVIPGTEIYDLWKQGKFSPMNDEKAIELIVYGKSIMPKWIRTSRIQRD CCCCCHHHHCCEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHC IPATVINEGVRKSNLGELVYNRLEELGIKCKCIRCREVGHVGYKKGIFPEIENIKLYRTD CCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEEC YDANFGKEVFLSFEDLKNDLLIGYLRLRIPSKPFRPEITDNTSIIRQVHVCGQQKELDAS CCCCCCHHHEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH SIESSWQHKGYGRLLIEEAEKISKEEFGKNQILINSGIGVIEYYKKLGYKKVGPYMGKIL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHCCHHHHHHC K C >Mature Secondary Structure SEYSKFIRCIIINLLAEKEKIRGLDPKRKKQKVEDIKAKCLRKHGLNTGFPPNSDVIAH CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE ATEEEKTEIVPILRKKPIRTLSGVSVVAVMTSPEPCPHGKCSFCPGGKESNFGNVPQSYT CCCHHCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTDKVELIIMGGTFPARDVGYQESFIKG CCCCCHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH CLDAMNGEISNSLNEAKLKNESAKHRCVALTIETRPDYCGEKEINQMLNLGATRVELGIQ HHHHHCCHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECHH STYGEVLDFVKRGHDIDASINATRLLKDSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDN HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC RYKPDLIKFYPCLVIPGTEIYDLWKQGKFSPMNDEKAIELIVYGKSIMPKWIRTSRIQRD CCCCCHHHHCCEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHC IPATVINEGVRKSNLGELVYNRLEELGIKCKCIRCREVGHVGYKKGIFPEIENIKLYRTD CCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEEC YDANFGKEVFLSFEDLKNDLLIGYLRLRIPSKPFRPEITDNTSIIRQVHVCGQQKELDAS CCCCCCHHHEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH SIESSWQHKGYGRLLIEEAEKISKEEFGKNQILINSGIGVIEYYKKLGYKKVGPYMGKIL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHCCHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]