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The map label for this gene is yfdZ [C]

Identifier: 150399591

GI number: 150399591

Start: 869641

End: 870891

Strand: Reverse

Name: yfdZ [C]

Synonym: Mevan_0840

Alternate gene names: 150399591

Gene position: 870891-869641 (Counterclockwise)

Preceding gene: 150399592

Following gene: 150399588

Centisome position: 50.63

GC content: 34.45

Gene sequence:

>1251_bases
ATGGAAAGTTACATTCAAAATCTCTTTTCTGAAAGGCTTGGTGGAAAAAATTTTGGTAAAGAAGATGTAATTTATAAATT
TGAAAAAATAAAGCGAGCAAAAAAAGCTGCTAAGTTAAAGTTTCCAAATGTTGAGTTAATTGACATGGGTGTTGGAGAAC
CTGATGAAATGGCCGATTCTTCAGTAGTTGATGTGTTATGTAATGAATCGAAAAAACCTGAAAATAGGGGTTACTCAGAT
AACGGAGTTCAGGAATTAAAGGATGAAATTCCAATTTACATGAAAGAAGTTTTTGGAGTTGGAGAATTAGATCCAGTAAA
CGAAGTAATTCATGCAATCGGTTCAAAACCTGCTTTAGCATATATTACCTCAGTATTTATTAATCCTGGCGATGTAACAC
TAATGACCGTTCCAGGATATCCCGTTACTGCAACCCACACAAAATGGTACGGTGGAAGTGTTGAACCACTCCCATTACTT
GAAAAAAATAAATTTTTACCCGAACTCGACGCAATTTCAAAAGAAGTGAAGGAAAAAGCAAAAATCCTTTATTTAAATTA
CCCAAATAATCCTACGGGCGCACAGGCAACAAAAAAATTTTACAAAAAAGCAGTTGATTTTGCATTTGAAAACGATGTAG
TAATCGTTCAAGATGCAGCATATGCAGCATTAACTTATGGGGAAAAACCACTTTCATTCCTTTCAGTAAATGACGCAAAA
GAAGTTGGGGTGGAAATCCACAGCTTTTCAAAAGCTTACAATATGACAGGATGGAGGCTTGCATTTGTTGCAGGAAACGA
ACTTATTGTAAGGGGTTTTGCAACGGTTAAAGATAATTACGACAGCGGTCAGTTCATTCCAATTCAAAAAGCAGGTATCC
ATTGCTTAAGACATCCTGAAATTACCGAAAAAACAAGGGTTAAATACGAAAGAAGACTTTTAAAAATGGTTAAAATATTA
AAAGAAGCAGGATTTAATGCAAAAATGCCAGGGGGAACTTTTTATCTCTACGTGAAAGCTCCAATTGGTACAAAAGGCGG
TGCTAAATTTGAAAATGCAGAAGAGTTTTCTCAGTATTTAATAAAAGAAAAATTAATTTCAACAGTTCCTTGGGACGATG
CAGGACACTACTTTAGAATGGCAGCATGTTTTGAGGCATTTAAAAATGGTGAAATTTCAGTTGAAGAAGAAGACCGAATT
TTAAATGAAGTTAAAAAAAGATTAACAGAAGTAGAGTTTGTTTTCGAATAA

Upstream 100 bases:

>100_bases
AATACATATTAAACTATATATTAAACTATATATTTGAATATATAGTAAAGTATTTATAGAAAGACTACTTATCTACTAAA
AATCACTTATTGGTGTTAAA

Downstream 100 bases:

>100_bases
ATTTTAAATTTTTTTATTTTTTTTCAAGTTTTAAAAGTGCTATTTTAGCAGCTTGTCTTTCAGCATCTTTTTTACTTTTA
CCTACACCCTTTGAAATAAT

Product: aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MESYIQNLFSERLGGKNFGKEDVIYKFEKIKRAKKAAKLKFPNVELIDMGVGEPDEMADSSVVDVLCNESKKPENRGYSD
NGVQELKDEIPIYMKEVFGVGELDPVNEVIHAIGSKPALAYITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVEPLPLL
EKNKFLPELDAISKEVKEKAKILYLNYPNNPTGAQATKKFYKKAVDFAFENDVVIVQDAAYAALTYGEKPLSFLSVNDAK
EVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFATVKDNYDSGQFIPIQKAGIHCLRHPEITEKTRVKYERRLLKMVKIL
KEAGFNAKMPGGTFYLYVKAPIGTKGGAKFENAEEFSQYLIKEKLISTVPWDDAGHYFRMAACFEAFKNGEISVEEEDRI
LNEVKKRLTEVEFVFE

Sequences:

>Translated_416_residues
MESYIQNLFSERLGGKNFGKEDVIYKFEKIKRAKKAAKLKFPNVELIDMGVGEPDEMADSSVVDVLCNESKKPENRGYSD
NGVQELKDEIPIYMKEVFGVGELDPVNEVIHAIGSKPALAYITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVEPLPLL
EKNKFLPELDAISKEVKEKAKILYLNYPNNPTGAQATKKFYKKAVDFAFENDVVIVQDAAYAALTYGEKPLSFLSVNDAK
EVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFATVKDNYDSGQFIPIQKAGIHCLRHPEITEKTRVKYERRLLKMVKIL
KEAGFNAKMPGGTFYLYVKAPIGTKGGAKFENAEEFSQYLIKEKLISTVPWDDAGHYFRMAACFEAFKNGEISVEEEDRI
LNEVKKRLTEVEFVFE
>Mature_416_residues
MESYIQNLFSERLGGKNFGKEDVIYKFEKIKRAKKAAKLKFPNVELIDMGVGEPDEMADSSVVDVLCNESKKPENRGYSD
NGVQELKDEIPIYMKEVFGVGELDPVNEVIHAIGSKPALAYITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVEPLPLL
EKNKFLPELDAISKEVKEKAKILYLNYPNNPTGAQATKKFYKKAVDFAFENDVVIVQDAAYAALTYGEKPLSFLSVNDAK
EVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFATVKDNYDSGQFIPIQKAGIHCLRHPEITEKTRVKYERRLLKMVKIL
KEAGFNAKMPGGTFYLYVKAPIGTKGGAKFENAEEFSQYLIKEKLISTVPWDDAGHYFRMAACFEAFKNGEISVEEEDRI
LNEVKKRLTEVEFVFE

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=304, Percent_Identity=22.0394736842105, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI56713254, Length=304, Percent_Identity=22.0394736842105, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI95147551, Length=312, Percent_Identity=21.474358974359, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI169881279, Length=312, Percent_Identity=21.474358974359, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI1788722, Length=390, Percent_Identity=32.0512820512821, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1786816, Length=328, Percent_Identity=21.0365853658537, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788627, Length=391, Percent_Identity=22.2506393861893, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=360, Percent_Identity=25, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71994476, Length=360, Percent_Identity=25, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17567369, Length=361, Percent_Identity=21.0526315789474, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573069, Length=354, Percent_Identity=21.7514124293785, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646114, Length=354, Percent_Identity=21.7514124293785, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573067, Length=354, Percent_Identity=21.7514124293785, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573065, Length=354, Percent_Identity=21.7514124293785, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 46789; Mature: 46789

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYIQNLFSERLGGKNFGKEDVIYKFEKIKRAKKAAKLKFPNVELIDMGVGEPDEMADS
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCH
SVVDVLCNESKKPENRGYSDNGVQELKDEIPIYMKEVFGVGELDPVNEVIHAIGSKPALA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHH
YITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVEPLPLLEKNKFLPELDAISKEVKEKA
HHHHHEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
KILYLNYPNNPTGAQATKKFYKKAVDFAFENDVVIVQDAAYAALTYGEKPLSFLSVNDAK
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEECCCHH
EVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFATVKDNYDSGQFIPIQKAGIHCLRHPE
HHCCHHHHHHHHHCCCCEEEEEEECCEEEEEEEHHCCCCCCCCCEEEEHHHCCCEECCCC
ITEKTRVKYERRLLKMVKILKEAGFNAKMPGGTFYLYVKAPIGTKGGAKFENAEEFSQYL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
IKEKLISTVPWDDAGHYFRMAACFEAFKNGEISVEEEDRILNEVKKRLTEVEFVFE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHEEEC
>Mature Secondary Structure
MESYIQNLFSERLGGKNFGKEDVIYKFEKIKRAKKAAKLKFPNVELIDMGVGEPDEMADS
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCH
SVVDVLCNESKKPENRGYSDNGVQELKDEIPIYMKEVFGVGELDPVNEVIHAIGSKPALA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHH
YITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVEPLPLLEKNKFLPELDAISKEVKEKA
HHHHHEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
KILYLNYPNNPTGAQATKKFYKKAVDFAFENDVVIVQDAAYAALTYGEKPLSFLSVNDAK
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEECCCHH
EVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFATVKDNYDSGQFIPIQKAGIHCLRHPE
HHCCHHHHHHHHHCCCCEEEEEEECCEEEEEEEHHCCCCCCCCCEEEEHHHCCCEECCCC
ITEKTRVKYERRLLKMVKILKEAGFNAKMPGGTFYLYVKAPIGTKGGAKFENAEEFSQYL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
IKEKLISTVPWDDAGHYFRMAACFEAFKNGEISVEEEDRILNEVKKRLTEVEFVFE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA