Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is trkH [C]

Identifier: 150399492

GI number: 150399492

Start: 783112

End: 784554

Strand: Reverse

Name: trkH [C]

Synonym: Mevan_0741

Alternate gene names: 150399492

Gene position: 784554-783112 (Counterclockwise)

Preceding gene: 150399493

Following gene: 150399491

Centisome position: 45.61

GC content: 31.95

Gene sequence:

>1443_bases
ATGAAAATTTTTAAAAAAAATGACATCCTTGGGATTTTACATGAGCTAGGGATATTAATTTCAACAATTGGCCTTATAAT
GATAATGCCTTCATTTATAGCAATATACTTTAATGAACCATTTTATTATTTTTTGTATCCTTCAATCTTCTTTATAATTT
TCGGTTTTTTATTGAATCGGGTTACAAAACCGATTTCAATTAAATTAAAGCATGCAATGGTTATTTCAGCATTGGCATGG
CTTACAGCATCATTTATTGGTGCAATTCCGTTCTACTTTGGAATACCTTATTTTGGTTATATTGACGGCGTTTTTGAAAG
TATGTCTGCATGGACCACAACTGGATTTACCATTATTAATGACGTAGAAGTTCTTCCAAAATCAATTCAAATATGGCGGA
GCCTTGAACAGTGGATAGGGGGAGTTGGAGTACTTGCAATGGTTATATCAATTCTTTCAAAAGCGGGAGCTTCTGCATAC
TACCGTGCGGAGGCAAGGGAAGAAAAGATAATGCCGAGCACACTTGGTACCATTAAAAAAATATGGCATATTTATTTATT
ATATACAATACTTGGAATATGCTTATTATATTTAAGTGGCTTAGATTTATGGACTACTTTAAATGTTATTCTTTGTGGCA
TTTCAACTGGTGGAATGAGCATAAGTAATGCAGGTTTTCCATATAATAACTTTGCAAAAATAATAATAATAGCAATAATG
TATCTTGGAGGCGTTGTTTCTTTTTCGGTACACCATAACGTTCTTACTGGGAGAAAAGTTAATGACATCCAAACAAAAAT
TTCAATTCCAATACTATTTTTTTCAGCATTTGTAATTTCAATAACTTCTGGAGTTGATCCATTAGATTCCCTATTTACCG
TAGTTTCTGCAATGACGAGTACTGGATTTTTAACTACGAGCACTTCAAATCTTACAAACATTTCAATTGCACTTTTAATA
TTTATAATGGCCGTAGGGGGGGCAACAGGTACTACTACGGGAGGCATTAAGTTAGTACGTCTATATATAATGATAAAAGG
ATTTTATTACCGATTAAAAGAAGCAGTTTCACCAAGTAATTCCATAATTTCCAAAAAAATTGGAAATAATATTCTTGAAG
ATTCTTTAATTTTAGATGCATTTTTGATAAGTTTTGGCTATATGTTACACTACATTTTTTCAGCATTAAGTTTAATTGCA
CTTGGTTATGATCCGTATTTGTCAATATTTGAGGCGGTGTCTCTTGTAGCAAACATAGGGCTTTCTGTTGGCATAGTAAG
TCATTCAATGCATCCAATTGCAAAAATCCTTGGTATTTTCTCAATGTGGGTTGGAAGGCTTGAAATTATTCCAATATATG
TCTTAATAATCTTACCGCTTTATATGAGGTTAAAAAGCGTGAAAAAAGATAAGAACTTTAAAGAAATCGAAAGTTATAAA
TAA

Upstream 100 bases:

>100_bases
AAACAGTTCAAAAGTGTTTGGAAATAGTTACAGATAGGTTTGTTGACTTAAACGAAGAATCTGAAGCCGATTCTGAGATA
TACTAATTTTTTGGGGGAGC

Downstream 100 bases:

>100_bases
TAATTTAACCTCTTTAAGTTGAATTGTATTTATTTTAATCCCGATAGACAAAAAAGGTGGGTTTATGGTCGAATTTTGTC
CAAAGTGTAACAATATCATG

Product: cation transporter

Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW
LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY
YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM
YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI
FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA
LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK

Sequences:

>Translated_480_residues
MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW
LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY
YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM
YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI
FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA
LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK
>Mature_480_residues
MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW
LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY
YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM
YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI
FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA
LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK

Specific function: Low-Affinity Potassium Transport System. Interacts With Trk System Potassium Uptake Protein Trka And Requires Trke For Transport Activity. [C]

COG id: COG0168

COG function: function code P; Trk-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trkH potassium transport family [H]

Homologues:

Organism=Escherichia coli, GI48994987, Length=429, Percent_Identity=30.3030303030303, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI1787626, Length=470, Percent_Identity=26.3829787234043, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003445 [H]

Pfam domain/function: PF02386 TrkH [H]

EC number: NA

Molecular weight: Translated: 53160; Mature: 53160

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VTKPISIKLKHAMVISALAWLTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIIN
HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEH
DVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAYYRAEAREEKIMPSTLGTIKK
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
IWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHH
YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TGFLTTSTSNLTNISIALLIFIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSN
CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
SIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIALGYDPYLSIFEAVSLVANIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VTKPISIKLKHAMVISALAWLTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIIN
HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEH
DVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAYYRAEAREEKIMPSTLGTIKK
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
IWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHH
YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TGFLTTSTSNLTNISIALLIFIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSN
CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
SIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIALGYDPYLSIFEAVSLVANIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]

Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]