| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is trkH [C]
Identifier: 150399492
GI number: 150399492
Start: 783112
End: 784554
Strand: Reverse
Name: trkH [C]
Synonym: Mevan_0741
Alternate gene names: 150399492
Gene position: 784554-783112 (Counterclockwise)
Preceding gene: 150399493
Following gene: 150399491
Centisome position: 45.61
GC content: 31.95
Gene sequence:
>1443_bases ATGAAAATTTTTAAAAAAAATGACATCCTTGGGATTTTACATGAGCTAGGGATATTAATTTCAACAATTGGCCTTATAAT GATAATGCCTTCATTTATAGCAATATACTTTAATGAACCATTTTATTATTTTTTGTATCCTTCAATCTTCTTTATAATTT TCGGTTTTTTATTGAATCGGGTTACAAAACCGATTTCAATTAAATTAAAGCATGCAATGGTTATTTCAGCATTGGCATGG CTTACAGCATCATTTATTGGTGCAATTCCGTTCTACTTTGGAATACCTTATTTTGGTTATATTGACGGCGTTTTTGAAAG TATGTCTGCATGGACCACAACTGGATTTACCATTATTAATGACGTAGAAGTTCTTCCAAAATCAATTCAAATATGGCGGA GCCTTGAACAGTGGATAGGGGGAGTTGGAGTACTTGCAATGGTTATATCAATTCTTTCAAAAGCGGGAGCTTCTGCATAC TACCGTGCGGAGGCAAGGGAAGAAAAGATAATGCCGAGCACACTTGGTACCATTAAAAAAATATGGCATATTTATTTATT ATATACAATACTTGGAATATGCTTATTATATTTAAGTGGCTTAGATTTATGGACTACTTTAAATGTTATTCTTTGTGGCA TTTCAACTGGTGGAATGAGCATAAGTAATGCAGGTTTTCCATATAATAACTTTGCAAAAATAATAATAATAGCAATAATG TATCTTGGAGGCGTTGTTTCTTTTTCGGTACACCATAACGTTCTTACTGGGAGAAAAGTTAATGACATCCAAACAAAAAT TTCAATTCCAATACTATTTTTTTCAGCATTTGTAATTTCAATAACTTCTGGAGTTGATCCATTAGATTCCCTATTTACCG TAGTTTCTGCAATGACGAGTACTGGATTTTTAACTACGAGCACTTCAAATCTTACAAACATTTCAATTGCACTTTTAATA TTTATAATGGCCGTAGGGGGGGCAACAGGTACTACTACGGGAGGCATTAAGTTAGTACGTCTATATATAATGATAAAAGG ATTTTATTACCGATTAAAAGAAGCAGTTTCACCAAGTAATTCCATAATTTCCAAAAAAATTGGAAATAATATTCTTGAAG ATTCTTTAATTTTAGATGCATTTTTGATAAGTTTTGGCTATATGTTACACTACATTTTTTCAGCATTAAGTTTAATTGCA CTTGGTTATGATCCGTATTTGTCAATATTTGAGGCGGTGTCTCTTGTAGCAAACATAGGGCTTTCTGTTGGCATAGTAAG TCATTCAATGCATCCAATTGCAAAAATCCTTGGTATTTTCTCAATGTGGGTTGGAAGGCTTGAAATTATTCCAATATATG TCTTAATAATCTTACCGCTTTATATGAGGTTAAAAAGCGTGAAAAAAGATAAGAACTTTAAAGAAATCGAAAGTTATAAA TAA
Upstream 100 bases:
>100_bases AAACAGTTCAAAAGTGTTTGGAAATAGTTACAGATAGGTTTGTTGACTTAAACGAAGAATCTGAAGCCGATTCTGAGATA TACTAATTTTTTGGGGGAGC
Downstream 100 bases:
>100_bases TAATTTAACCTCTTTAAGTTGAATTGTATTTATTTTAATCCCGATAGACAAAAAAGGTGGGTTTATGGTCGAATTTTGTC CAAAGTGTAACAATATCATG
Product: cation transporter
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK
Sequences:
>Translated_480_residues MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK >Mature_480_residues MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNRVTKPISIKLKHAMVISALAW LTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIINDVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAY YRAEAREEKIMPSTLGTIKKIWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTSTGFLTTSTSNLTNISIALLI FIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSNSIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIA LGYDPYLSIFEAVSLVANIGLSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK
Specific function: Low-Affinity Potassium Transport System. Interacts With Trk System Potassium Uptake Protein Trka And Requires Trke For Transport Activity. [C]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI48994987, Length=429, Percent_Identity=30.3030303030303, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1787626, Length=470, Percent_Identity=26.3829787234043, Blast_Score=136, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 53160; Mature: 53160
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VTKPISIKLKHAMVISALAWLTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIIN HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEH DVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAYYRAEAREEKIMPSTLGTIKK HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH IWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHH YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGFLTTSTSNLTNISIALLIFIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSN CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH SIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIALGYDPYLSIFEAVSLVANIG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC LSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MKIFKKNDILGILHELGILISTIGLIMIMPSFIAIYFNEPFYYFLYPSIFFIIFGFLLNR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VTKPISIKLKHAMVISALAWLTASFIGAIPFYFGIPYFGYIDGVFESMSAWTTTGFTIIN HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEH DVEVLPKSIQIWRSLEQWIGGVGVLAMVISILSKAGASAYYRAEAREEKIMPSTLGTIKK HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH IWHIYLLYTILGICLLYLSGLDLWTTLNVILCGISTGGMSISNAGFPYNNFAKIIIIAIM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHH YLGGVVSFSVHHNVLTGRKVNDIQTKISIPILFFSAFVISITSGVDPLDSLFTVVSAMTS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGFLTTSTSNLTNISIALLIFIMAVGGATGTTTGGIKLVRLYIMIKGFYYRLKEAVSPSN CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH SIISKKIGNNILEDSLILDAFLISFGYMLHYIFSALSLIALGYDPYLSIFEAVSLVANIG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC LSVGIVSHSMHPIAKILGIFSMWVGRLEIIPIYVLIILPLYMRLKSVKKDKNFKEIESYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]