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The map label for this gene is lysS [H]

Identifier: 150399380

GI number: 150399380

Start: 684097

End: 685698

Strand: Reverse

Name: lysS [H]

Synonym: Mevan_0629

Alternate gene names: 150399380

Gene position: 685698-684097 (Counterclockwise)

Preceding gene: 150399392

Following gene: 150399379

Centisome position: 39.87

GC content: 35.08

Gene sequence:

>1602_bases
ATGCACTGGGCTGATGCAACAGCGGAAAAAATCATGAAAAAAAGAAATGTGGAAAAATACGTGGTTTCAAGTGGTATTAC
TCCATCGGGCCACATACACATCGGAAATGCGAGAGAAACACTGACTGCAGATGCAGTACATAAGGGACTTCTTAATAACG
GGTTAGAAAGTAAATTAATTTTTGTTGCAGATGATTATGACCCATTAAGGAAACTATATCCATTTTTAACGCAAGATTTT
GAAAAATATATAGGAATGCCTTTAAGTGAGATCCCTTGTCCTGAAGGATGCTGTGAAAGTTATGCTGACCACTTTTTAAA
GCCATTTTTAAATAGCTTAAATGGACTTGGAGTCGAACTTACGACTTACCGAGCAAACGAGTGCTACAAAGCAGGAATGT
ATAATGAAGTAATTATAAAAGCACTTGAAAATAGGTTAAAAATCAAAGAAATTCTTGATTCATACCGAAAAGAACCGCTT
GCTGATGATTGGTATCCATTAAACATAGTTTGTGAAAAATGCGGTAAAATGAATCAGTCAAAAGTAGTTGCATATAAAAG
CGAAGATAAAACCGTAACTTACGTATGCAAATGCGGATTTGAAAACACAGTTAATCCATTTAACGGGATTGGAAAACTTC
CATGGCGAGTAGACTGGCCTGCAAGGTGGGGTATTTTTGGAGTTACGGTAGAGCCAATGGGTAAAGACCATGCTGCATCA
GGCGGCTCTTATGATACAGGAATTAAAATTGCAAGGCAGATTTATGAATATATTGCACCAGAAAAGATAGTTTACGAGTG
GATTCAGTTAAAGGTAGGAGATAGGGCAATGCCAATGTCGTCTTCTGCAGGGGTTGTATTTGCAGTAAAAGATTGGAATG
AGATATGCCACCCTGAAGTTTTAAGATTTTTAATTTTAAGGGGGAAACCAACAAAGCATATTGATTTTGACTTAAAAGCA
GTTTCAAACCTTGTTGATGACTATGACGAACTTGAGAGAAAGTATTTTGAGTTAGTTGAAAAGAAAGAAACCGAAAGTTT
GAATGAAAATGAAGAAGAAAAGTTAAGAATTTACGAATACACTACACCAAATATTCCAGAAAAGTTGCCTTTACAGGTGC
CTTACAGGTTTGCTTCAATTATTGCACAGATTGCATGGAATGACGAAAAGCAGACAATTGATATTGAAAGAGTTCTTGAT
ATTTTGGGAAGAAATGGGTATATGCCATCTAAATTTTCAGAATATGATATTAAACGACTTGAAACAAGGCTTAAAATGTC
TAAAAAGTGGGCATCGGATTACGGTGAAAATTTAGAAATTTTGGGTCTTGAAAAAGCAAAAGAACAGTTTGAAATACTTT
CAGAAAATCAAAAAGAATGGCTAACTGAATTTGCAAATAATTTGAATGAGATTGAACCTGACGCAAGTGTTATTCATGAA
TTAATGTATGAAAGTGCGATAAAATTGGGTTTAGAACCAAAAGATGCATTTACTGCTTCATACAACCTCCTTCTTGGTAA
AAATTATGGCCCAAAGCTCGGGAGTTTTTTAGCCGCTCTTAAAAAGGATTTTGTAGTAAACAGATTTTTATTAAGAGAAT
AA

Upstream 100 bases:

>100_bases
TATATAAAATATTTTTTACTATATCCTAAAAAACCATTATTTTTGATTTAAACTACTATTTTTTGGTTTTTCACGTTTTA
ATATAATTGGAGGAAACACA

Downstream 100 bases:

>100_bases
ATTATTATAATAAGTAATTATTTCGACTTTTTTAAATTTTTATTAAAGATATTATTTAAACTAAATTTAAATCAAAAAAT
ATATAATACTTACCAGATAT

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MHWADATAEKIMKKRNVEKYVVSSGITPSGHIHIGNARETLTADAVHKGLLNNGLESKLIFVADDYDPLRKLYPFLTQDF
EKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVELTTYRANECYKAGMYNEVIIKALENRLKIKEILDSYRKEPL
ADDWYPLNIVCEKCGKMNQSKVVAYKSEDKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAAS
GGSYDTGIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEVLRFLILRGKPTKHIDFDLKA
VSNLVDDYDELERKYFELVEKKETESLNENEEEKLRIYEYTTPNIPEKLPLQVPYRFASIIAQIAWNDEKQTIDIERVLD
ILGRNGYMPSKFSEYDIKRLETRLKMSKKWASDYGENLEILGLEKAKEQFEILSENQKEWLTEFANNLNEIEPDASVIHE
LMYESAIKLGLEPKDAFTASYNLLLGKNYGPKLGSFLAALKKDFVVNRFLLRE

Sequences:

>Translated_533_residues
MHWADATAEKIMKKRNVEKYVVSSGITPSGHIHIGNARETLTADAVHKGLLNNGLESKLIFVADDYDPLRKLYPFLTQDF
EKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVELTTYRANECYKAGMYNEVIIKALENRLKIKEILDSYRKEPL
ADDWYPLNIVCEKCGKMNQSKVVAYKSEDKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAAS
GGSYDTGIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEVLRFLILRGKPTKHIDFDLKA
VSNLVDDYDELERKYFELVEKKETESLNENEEEKLRIYEYTTPNIPEKLPLQVPYRFASIIAQIAWNDEKQTIDIERVLD
ILGRNGYMPSKFSEYDIKRLETRLKMSKKWASDYGENLEILGLEKAKEQFEILSENQKEWLTEFANNLNEIEPDASVIHE
LMYESAIKLGLEPKDAFTASYNLLLGKNYGPKLGSFLAALKKDFVVNRFLLRE
>Mature_533_residues
MHWADATAEKIMKKRNVEKYVVSSGITPSGHIHIGNARETLTADAVHKGLLNNGLESKLIFVADDYDPLRKLYPFLTQDF
EKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVELTTYRANECYKAGMYNEVIIKALENRLKIKEILDSYRKEPL
ADDWYPLNIVCEKCGKMNQSKVVAYKSEDKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAAS
GGSYDTGIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEVLRFLILRGKPTKHIDFDLKA
VSNLVDDYDELERKYFELVEKKETESLNENEEEKLRIYEYTTPNIPEKLPLQVPYRFASIIAQIAWNDEKQTIDIERVLD
ILGRNGYMPSKFSEYDIKRLETRLKMSKKWASDYGENLEILGLEKAKEQFEILSENQKEWLTEFANNLNEIEPDASVIHE
LMYESAIKLGLEPKDAFTASYNLLLGKNYGPKLGSFLAALKKDFVVNRFLLRE

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 61184; Mature: 61184

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWADATAEKIMKKRNVEKYVVSSGITPSGHIHIGNARETLTADAVHKGLLNNGLESKLI
CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEE
FVADDYDPLRKLYPFLTQDFEKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVEL
EEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
TTYRANECYKAGMYNEVIIKALENRLKIKEILDSYRKEPLADDWYPLNIVCEKCGKMNQS
EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
KVVAYKSEDKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAAS
EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCC
GGSYDTGIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEV
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCHHCCCHHH
LRFLILRGKPTKHIDFDLKAVSNLVDDYDELERKYFELVEKKETESLNENEEEKLRIYEY
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TTPNIPEKLPLQVPYRFASIIAQIAWNDEKQTIDIERVLDILGRNGYMPSKFSEYDIKRL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHCCCCCCCCCCCHHHHHHH
ETRLKMSKKWASDYGENLEILGLEKAKEQFEILSENQKEWLTEFANNLNEIEPDASVIHE
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHH
LMYESAIKLGLEPKDAFTASYNLLLGKNYGPKLGSFLAALKKDFVVNRFLLRE
HHHHHHHHCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHWADATAEKIMKKRNVEKYVVSSGITPSGHIHIGNARETLTADAVHKGLLNNGLESKLI
CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEE
FVADDYDPLRKLYPFLTQDFEKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVEL
EEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
TTYRANECYKAGMYNEVIIKALENRLKIKEILDSYRKEPLADDWYPLNIVCEKCGKMNQS
EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
KVVAYKSEDKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAAS
EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCC
GGSYDTGIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEV
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCHHCCCHHH
LRFLILRGKPTKHIDFDLKAVSNLVDDYDELERKYFELVEKKETESLNENEEEKLRIYEY
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TTPNIPEKLPLQVPYRFASIIAQIAWNDEKQTIDIERVLDILGRNGYMPSKFSEYDIKRL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHCCCCCCCCCCCHHHHHHH
ETRLKMSKKWASDYGENLEILGLEKAKEQFEILSENQKEWLTEFANNLNEIEPDASVIHE
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHH
LMYESAIKLGLEPKDAFTASYNLLLGKNYGPKLGSFLAALKKDFVVNRFLLRE
HHHHHHHHCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353192; 11121028 [H]