Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399353

Identifier: 150399353

GI number: 150399353

Start: 654682

End: 656547

Strand: Reverse

Name: 150399353

Synonym: Mevan_0602

Alternate gene names: NA

Gene position: 656547-654682 (Counterclockwise)

Preceding gene: 150399354

Following gene: 150399352

Centisome position: 38.17

GC content: 33.28

Gene sequence:

>1866_bases
ATGGTCGGAATTATTGGAAACGGAAACGTACTTGCAAAAGTAGATGATTCAGGTTCTATTGAGTACATGTTTTATCCAAA
TATTGGATATGAAAAACACGTGTTAGATGCAACGTTTGCAATATATAATGGTGGATTAAAATGGGCTTGGAATAACGATT
GGATTATAAAGCAAAATTACGTAAAAGAAACAAATATCTTAAGAACTTCGTATGAATCCAAAGAATACCTTTTAGAGTCA
AGAGATTACGTTCCAATATCTCACAACATGATTATAAAACAACTCTCAGTCACTAATAAAACCGAAGAAATCCAAAATAT
AAAACTATTTTTTTATGAAAATATCCGGATGGGTGAGATTCCAAATGAAAACACTGTCCGGTTTATAAAAGATAGGCAGT
TATTAGTGAAATACGATGGAAAGTACGTATTTAGCGTTGGAAGTAATAAAAAAATTTCATCGTACCAATGTGGGGTTCGT
TCAACTGATAAAAGTGCATTAACAGACATGGCAAATGGCATATTAAAAGAATACCCAAAATCAAAAGGATTAATAACAGA
TAGTGCATTATCTTGGGATTTAGTATTAAATCCCGGTCAAAAGCAGACAATTTCTGTTTTTTTAATGGTTGAAAAATACG
ATGGAAGCTATCCTAAAATTATAGACACATTGGATTTAACAAGAGTCATTATCGATAATCACGAGGACTTTTACGAACTT
ACTCATGCATATTGGAAGAATATTTTAGATACTGCCGTAAGTAGACTAAGTGAGAATGAATTAAATCGGGTTTCACACTA
TGAAGAATTATGTAAGCGCTCTCTTTTAACAATATTATTATTATGTAGTAGAAATGGCGGTATAATGGCGTCACCTTCCC
TGTATCCGGATTACCGGCACGTATGGTGTAGGGATGGGGGTTACATGGCAGTTGCACTTGACTTATGCGGCCAGCATTTA
GTTACGGAAAAATATTTTGAATGGTGTAGGAAAACCCAAAATCAAGATGGCTCATGGATACAAAGTTATCATGTTGATGG
ATCCCCGCGGCTTACTGCAATTCAAAACGACCAAATTGGAACTACATTATGGGCCCTACTGGTTCACTACCGAAAAACAG
AAAATATTAACTCCCTTAAAAAAAACTGGGGGATGGTAAAAAAAGCTGCAAACTATCTAGTAAACGTATTAAACAATCAA
TCATTAAGTTACGATTTATGGGAGGAAAAATATGGCCTCTTTACTTACACAATTGGTTCAATTTACGGAGGGCTAAAGTC
AGCAGTTGAAATTTCAAAAATTATCGAAGATAATTCTTCCGACGTTAAAAATTGGATTTATTCAGCTGAATTTTTGAAAA
AAGAAATGATAAAAAAAATTTACTCTGAAGAAGATAACCGATTTTTAAAGTCTGTAAGTCCTAAAGATAATACAGTCGAT
TCAAGTATTCTTGGAATATGTTTCCCATTTAACCTTGTAGATCCTGATGATCCTAAAATGGTAAATACTGCAAGTCAAAT
TGAAGGTGCATTTAATTATAAAATTGGCGGAATTGGGCGATACCCTGAAGATGTCTATTTTGGCGGAAACCCTTGGATCA
TAAATACACTATGGCTGCACATGTACTATGAACAATTAATAAGGGCCTTTTTGAAAAATAATGCCATAAAACGTGAAATA
GTTGAGTCTTACATTCAAAAAAGTATATCTTTATTTGAATGGACGTTAAAAAATAATTTCAGTGGTTTATTTCCCGAACA
AATTCATAAGGATTTGAAAGTTCCAATTTCTGCAATGCCTTTAGGTTGGTCACATGCAATGTTTATAATTGCAGTTCATG
GAGATCTTGATATTTTAATTCCATAA

Upstream 100 bases:

>100_bases
ATAGTTATCTTTTACATTTTATAACTACATTATATAACCATTATATTACAGTTATAAATTTAATACATGATTTAAGTTTT
TATTTTTAGGGCGTGGTTTT

Downstream 100 bases:

>100_bases
CTTTTAATTTTAATATTTTAAATTTAAATTAGAACTTTTTATCTATCAAAAGGTGGGTATTTGTGTATTTGTCTCTTAAT
TTTGAAGTTCACCAGCCAAA

Product: glycoside hydrolase 15-like protein

Products: D-glucuronate; alcohol

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MVGIIGNGNVLAKVDDSGSIEYMFYPNIGYEKHVLDATFAIYNGGLKWAWNNDWIIKQNYVKETNILRTSYESKEYLLES
RDYVPISHNMIIKQLSVTNKTEEIQNIKLFFYENIRMGEIPNENTVRFIKDRQLLVKYDGKYVFSVGSNKKISSYQCGVR
STDKSALTDMANGILKEYPKSKGLITDSALSWDLVLNPGQKQTISVFLMVEKYDGSYPKIIDTLDLTRVIIDNHEDFYEL
THAYWKNILDTAVSRLSENELNRVSHYEELCKRSLLTILLLCSRNGGIMASPSLYPDYRHVWCRDGGYMAVALDLCGQHL
VTEKYFEWCRKTQNQDGSWIQSYHVDGSPRLTAIQNDQIGTTLWALLVHYRKTENINSLKKNWGMVKKAANYLVNVLNNQ
SLSYDLWEEKYGLFTYTIGSIYGGLKSAVEISKIIEDNSSDVKNWIYSAEFLKKEMIKKIYSEEDNRFLKSVSPKDNTVD
SSILGICFPFNLVDPDDPKMVNTASQIEGAFNYKIGGIGRYPEDVYFGGNPWIINTLWLHMYYEQLIRAFLKNNAIKREI
VESYIQKSISLFEWTLKNNFSGLFPEQIHKDLKVPISAMPLGWSHAMFIIAVHGDLDILIP

Sequences:

>Translated_621_residues
MVGIIGNGNVLAKVDDSGSIEYMFYPNIGYEKHVLDATFAIYNGGLKWAWNNDWIIKQNYVKETNILRTSYESKEYLLES
RDYVPISHNMIIKQLSVTNKTEEIQNIKLFFYENIRMGEIPNENTVRFIKDRQLLVKYDGKYVFSVGSNKKISSYQCGVR
STDKSALTDMANGILKEYPKSKGLITDSALSWDLVLNPGQKQTISVFLMVEKYDGSYPKIIDTLDLTRVIIDNHEDFYEL
THAYWKNILDTAVSRLSENELNRVSHYEELCKRSLLTILLLCSRNGGIMASPSLYPDYRHVWCRDGGYMAVALDLCGQHL
VTEKYFEWCRKTQNQDGSWIQSYHVDGSPRLTAIQNDQIGTTLWALLVHYRKTENINSLKKNWGMVKKAANYLVNVLNNQ
SLSYDLWEEKYGLFTYTIGSIYGGLKSAVEISKIIEDNSSDVKNWIYSAEFLKKEMIKKIYSEEDNRFLKSVSPKDNTVD
SSILGICFPFNLVDPDDPKMVNTASQIEGAFNYKIGGIGRYPEDVYFGGNPWIINTLWLHMYYEQLIRAFLKNNAIKREI
VESYIQKSISLFEWTLKNNFSGLFPEQIHKDLKVPISAMPLGWSHAMFIIAVHGDLDILIP
>Mature_621_residues
MVGIIGNGNVLAKVDDSGSIEYMFYPNIGYEKHVLDATFAIYNGGLKWAWNNDWIIKQNYVKETNILRTSYESKEYLLES
RDYVPISHNMIIKQLSVTNKTEEIQNIKLFFYENIRMGEIPNENTVRFIKDRQLLVKYDGKYVFSVGSNKKISSYQCGVR
STDKSALTDMANGILKEYPKSKGLITDSALSWDLVLNPGQKQTISVFLMVEKYDGSYPKIIDTLDLTRVIIDNHEDFYEL
THAYWKNILDTAVSRLSENELNRVSHYEELCKRSLLTILLLCSRNGGIMASPSLYPDYRHVWCRDGGYMAVALDLCGQHL
VTEKYFEWCRKTQNQDGSWIQSYHVDGSPRLTAIQNDQIGTTLWALLVHYRKTENINSLKKNWGMVKKAANYLVNVLNNQ
SLSYDLWEEKYGLFTYTIGSIYGGLKSAVEISKIIEDNSSDVKNWIYSAEFLKKEMIKKIYSEEDNRFLKSVSPKDNTVD
SSILGICFPFNLVDPDDPKMVNTASQIEGAFNYKIGGIGRYPEDVYFGGNPWIINTLWLHMYYEQLIRAFLKNNAIKREI
VESYIQKSISLFEWTLKNNFSGLFPEQIHKDLKVPISAMPLGWSHAMFIIAVHGDLDILIP

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 15 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR006465
- InterPro:   IPR000165
- InterPro:   IPR011613 [H]

Pfam domain/function: PF00723 Glyco_hydro_15 [H]

EC number: 3.2.1.3

Molecular weight: Translated: 71473; Mature: 71473

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIIGNGNVLAKVDDSGSIEYMFYPNIGYEKHVLDATFAIYNGGLKWAWNNDWIIKQNY
CEEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHEEEEECCCEEEEECCCEEEECCC
VKETNILRTSYESKEYLLESRDYVPISHNMIIKQLSVTNKTEEIQNIKLFFYENIRMGEI
CCHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHCEEEEEEEECEEECCC
PNENTVRFIKDRQLLVKYDGKYVFSVGSNKKISSYQCGVRSTDKSALTDMANGILKEYPK
CCCCCEEEEECCEEEEEECCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCC
SKGLITDSALSWDLVLNPGQKQTISVFLMVEKYDGSYPKIIDTLDLTRVIIDNHEDFYEL
CCCCEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHH
THAYWKNILDTAVSRLSENELNRVSHYEELCKRSLLTILLLCSRNGGIMASPSLYPDYRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCE
VWCRDGGYMAVALDLCGQHLVTEKYFEWCRKTQNQDGSWIQSYHVDGSPRLTAIQNDQIG
EEECCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCH
TTLWALLVHYRKTENINSLKKNWGMVKKAANYLVNVLNNQSLSYDLWEEKYGLFTYTIGS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCEEEEEHHH
IYGGLKSAVEISKIIEDNSSDVKNWIYSAEFLKKEMIKKIYSEEDNRFLKSVSPKDNTVD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
SSILGICFPFNLVDPDDPKMVNTASQIEGAFNYKIGGIGRYPEDVYFGGNPWIINTLWLH
CCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEECCCCEEHHHHHHH
MYYEQLIRAFLKNNAIKREIVESYIQKSISLFEWTLKNNFSGLFPEQIHKDLKVPISAMP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHCCCCEECC
LGWSHAMFIIAVHGDLDILIP
CCCCCEEEEEEEECCEEEECC
>Mature Secondary Structure
MVGIIGNGNVLAKVDDSGSIEYMFYPNIGYEKHVLDATFAIYNGGLKWAWNNDWIIKQNY
CEEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHEEEEECCCEEEEECCCEEEECCC
VKETNILRTSYESKEYLLESRDYVPISHNMIIKQLSVTNKTEEIQNIKLFFYENIRMGEI
CCHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHCEEEEEEEECEEECCC
PNENTVRFIKDRQLLVKYDGKYVFSVGSNKKISSYQCGVRSTDKSALTDMANGILKEYPK
CCCCCEEEEECCEEEEEECCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCC
SKGLITDSALSWDLVLNPGQKQTISVFLMVEKYDGSYPKIIDTLDLTRVIIDNHEDFYEL
CCCCEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHH
THAYWKNILDTAVSRLSENELNRVSHYEELCKRSLLTILLLCSRNGGIMASPSLYPDYRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCE
VWCRDGGYMAVALDLCGQHLVTEKYFEWCRKTQNQDGSWIQSYHVDGSPRLTAIQNDQIG
EEECCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCH
TTLWALLVHYRKTENINSLKKNWGMVKKAANYLVNVLNNQSLSYDLWEEKYGLFTYTIGS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCEEEEEHHH
IYGGLKSAVEISKIIEDNSSDVKNWIYSAEFLKKEMIKKIYSEEDNRFLKSVSPKDNTVD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
SSILGICFPFNLVDPDDPKMVNTASQIEGAFNYKIGGIGRYPEDVYFGGNPWIINTLWLH
CCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEECCCCEEHHHHHHH
MYYEQLIRAFLKNNAIKREIVESYIQKSISLFEWTLKNNFSGLFPEQIHKDLKVPISAMP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHCCCCEECC
LGWSHAMFIIAVHGDLDILIP
CCCCCEEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; beta-D-glucuronoside

Specific reaction: H2O + a beta-D-glucuronoside = D-glucuronate + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]