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The map label for this gene is slyD [C]

Identifier: 150399258

GI number: 150399258

Start: 553207

End: 553659

Strand: Reverse

Name: slyD [C]

Synonym: Mevan_0506

Alternate gene names: 150399258

Gene position: 553659-553207 (Counterclockwise)

Preceding gene: 150399268

Following gene: 150399257

Centisome position: 32.19

GC content: 35.1

Gene sequence:

>453_bases
TTGATTACAAAAGGAGATAGAATATTGGTCGATTATACGGGCAGATTTGATGAAGGAGAAGTTTTTGATACGTCAATTGA
AGCAGTAGCAAAAGAAGAAGGGATTTATGAGGAAGAAAGACCATACCAGCCGTTAGAATTTGTTGTTGGTGAGGGGCAAT
TAATCCAAGGATTTGAAGAAGCAGTTTTAGGTCTTAATGTAGGGGAAGAAGTAACAGTTACAATCTCTCCTGAAAAAGGA
TACGGATTTAGGGATGAATCGTTAATTGAAAGAGTTCCAATTGATGCATTTGACGAAGCAGATTTTGAACCTGAAGAAGG
AATGGTAATTGTTGCAGGTGATGAACCAGCAGTAATTTTAGAAGTAACTGATGAAGATGTAGCACTTGACTTTAACCACG
AATTAGCTGGGGAAACATTAAAATTTACAATTAAAATTGTAAAAAAATTTTAA

Upstream 100 bases:

>100_bases
AATTTACAGAGTTAGTGTAGAAAATAGCGCCATAATAAGCTATATATATTATATTGTTTATTTGATAGATAGTCACATAT
TGAGCTAGGAGTTGATTTTT

Downstream 100 bases:

>100_bases
TTTAGTTTAAGTCTAATATTTCTAAAACTTGAACTGAATAAAACCTATAAGATTTAATAAAAGTCATAATAGAAATTATA
ATCATATACTATTTAATAAA

Product: FKBP type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: PPIase; MtFK; Rotamase [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MITKGDRILVDYTGRFDEGEVFDTSIEAVAKEEGIYEEERPYQPLEFVVGEGQLIQGFEEAVLGLNVGEEVTVTISPEKG
YGFRDESLIERVPIDAFDEADFEPEEGMVIVAGDEPAVILEVTDEDVALDFNHELAGETLKFTIKIVKKF

Sequences:

>Translated_150_residues
MITKGDRILVDYTGRFDEGEVFDTSIEAVAKEEGIYEEERPYQPLEFVVGEGQLIQGFEEAVLGLNVGEEVTVTISPEKG
YGFRDESLIERVPIDAFDEADFEPEEGMVIVAGDEPAVILEVTDEDVALDFNHELAGETLKFTIKIVKKF
>Mature_150_residues
MITKGDRILVDYTGRFDEGEVFDTSIEAVAKEEGIYEEERPYQPLEFVVGEGQLIQGFEEAVLGLNVGEEVTVTISPEKG
YGFRDESLIERVPIDAFDEADFEPEEGMVIVAGDEPAVILEVTDEDVALDFNHELAGETLKFTIKIVKKF

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789748, Length=124, Percent_Identity=39.5161290322581, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI1786211, Length=152, Percent_Identity=27.6315789473684, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16738; Mature: 16738

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKGDRILVDYTGRFDEGEVFDTSIEAVAKEEGIYEEERPYQPLEFVVGEGQLIQGFEE
CCCCCCEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH
AVLGLNVGEEVTVTISPEKGYGFRDESLIERVPIDAFDEADFEPEEGMVIVAGDEPAVIL
HHCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEE
EVTDEDVALDFNHELAGETLKFTIKIVKKF
EECCCCEEEECCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MITKGDRILVDYTGRFDEGEVFDTSIEAVAKEEGIYEEERPYQPLEFVVGEGQLIQGFEE
CCCCCCEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH
AVLGLNVGEEVTVTISPEKGYGFRDESLIERVPIDAFDEADFEPEEGMVIVAGDEPAVIL
HHCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEE
EVTDEDVALDFNHELAGETLKFTIKIVKKF
EECCCCEEEECCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9440528 [H]