| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399256
Identifier: 150399256
GI number: 150399256
Start: 551927
End: 552202
Strand: Reverse
Name: 150399256
Synonym: Mevan_0504
Alternate gene names: NA
Gene position: 552202-551927 (Counterclockwise)
Preceding gene: 150399257
Following gene: 150399252
Centisome position: 32.1
GC content: 34.42
Gene sequence:
>276_bases ATGTTTAGCCCAAAAAAATTATCCTCAGCAGACAAGTTTAAAAATATTTCAGGAATGCTTGAAGAAATTATTGAAGATAC AACGGTTCCTAGAAACATCAGGGCTGCAGCAGACAATGCAAAAGCCGCACTAAATAATGAAGAACAGGAATTAATTGTAA GAAGTGCTACTGCAATCCAATATTTAGACGACATTAGCGATGACCCTAATATGCCAATTCACACGAGAACTCAGATATGG AGTATTGTAAGTGAACTTGAAACAATTAAAAATTAA
Upstream 100 bases:
>100_bases TTTAACCTCAATCTTTAAATATGACATGCATTAATCATATTATGCAATTAGTTGAATTTACAGTTTTTTTAATTAAACAC GGGCCAAAAGAGGTGAAACC
Downstream 100 bases:
>100_bases ATTTTCAATTTTTAGTTTATTTTAAATTTAGATTTAAATTCTTAAAAAAAGATTTAAATTTTTAGAACGATTATTTATCA AAAGACATTACTATATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MFSPKKLSSADKFKNISGMLEEIIEDTTVPRNIRAAADNAKAALNNEEQELIVRSATAIQYLDDISDDPNMPIHTRTQIW SIVSELETIKN
Sequences:
>Translated_91_residues MFSPKKLSSADKFKNISGMLEEIIEDTTVPRNIRAAADNAKAALNNEEQELIVRSATAIQYLDDISDDPNMPIHTRTQIW SIVSELETIKN >Mature_91_residues MFSPKKLSSADKFKNISGMLEEIIEDTTVPRNIRAAADNAKAALNNEEQELIVRSATAIQYLDDISDDPNMPIHTRTQIW SIVSELETIKN
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943 [H]
Pfam domain/function: PF03685 UPF0147 [H]
EC number: NA
Molecular weight: Translated: 10218; Mature: 10218
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPKKLSSADKFKNISGMLEEIIEDTTVPRNIRAAADNAKAALNNEEQELIVRSATAIQ CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHH YLDDISDDPNMPIHTRTQIWSIVSELETIKN HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSPKKLSSADKFKNISGMLEEIIEDTTVPRNIRAAADNAKAALNNEEQELIVRSATAIQ CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHH YLDDISDDPNMPIHTRTQIWSIVSELETIKN HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]