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The map label for this gene is 150399222

Identifier: 150399222

GI number: 150399222

Start: 522670

End: 522888

Strand: Reverse

Name: 150399222

Synonym: Mevan_0470

Alternate gene names: NA

Gene position: 522888-522670 (Counterclockwise)

Preceding gene: 150399224

Following gene: 150399221

Centisome position: 30.4

GC content: 34.25

Gene sequence:

>219_bases
ATGATGGACACACAAAGACCATTAGATGCTTTAGGTAAGTCAATTAACACAAATGTTACTGTGTACTTAAAAGACGGTAA
ACTTGTTAAGGGAAGACTAAAAGCTTATGACTTACACATGAATGTTGCATTAGAAAATGCAAAAATTGAAAGTGATGAAG
AAAAAGAATTCCCAATGTTGGTCGTAAGGGGCGACAACGTACTTTACGTATCACTATAA

Upstream 100 bases:

>100_bases
AATAAAAAGTAAATATTTGGAAAGTATTATATATCAGAACTATTTATTTATTTCTACAAACCAGATTTAGCAGTTGTTTT
TTATTATGCGAGGTGCGAAT

Downstream 100 bases:

>100_bases
TACATTATTTTAATAAATAATGTATTAAAAGCATTATTTTTAGTACCCTATGAATATATCGTGAAATCAATAGTTAGTTT
TTTATGTGATTTCGACATAT

Product: small nuclear riboprotein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIESDEEKEFPMLVVRGDNVLYVSL

Sequences:

>Translated_72_residues
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIESDEEKEFPMLVVRGDNVLYVSL
>Mature_72_residues
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIESDEEKEFPMLVVRGDNVLYVSL

Specific function: Unknown

COG id: COG1958

COG function: function code K; Small nuclear ribonucleoprotein (snRNP) homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the snRNP Sm proteins family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR001163
- InterPro:   IPR006649
- InterPro:   IPR022901 [H]

Pfam domain/function: PF01423 LSM [H]

EC number: NA

Molecular weight: Translated: 8140; Mature: 8140

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIESDEEKEFPML
CCCCCCCHHHCCCCCCCCEEEEECCCEEEECEEEEEEEEEEEEEECCCCCCCCCCCCCEE
VVRGDNVLYVSL
EECCCCEEEEEC
>Mature Secondary Structure
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIESDEEKEFPML
CCCCCCCHHHCCCCCCCCEEEEECCCEEEECEEEEEEEEEEEEEECCCCCCCCCCCCCEE
VVRGDNVLYVSL
EECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA