| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is cdhA [H]
Identifier: 150399065
GI number: 150399065
Start: 361148
End: 363487
Strand: Reverse
Name: cdhA [H]
Synonym: Mevan_0311
Alternate gene names: 150399065
Gene position: 363487-361148 (Counterclockwise)
Preceding gene: 150399066
Following gene: 150399064
Centisome position: 21.13
GC content: 37.69
Gene sequence:
>2340_bases ATGGCATTTGAAAAGACGGCTAAAAAACTTGATGACAATTTTTGGAATACCAAAAATCTTAAAATATCTATTGGAGAAGT TTCTGATGGTAAATCTGCTAAATCTAAGCTTGATGAACCAATGGGGCCTACGCCAAAACCAAGTGTAACGGATCTTAGAT CTTGGGATTTTAAATTATTAAAGAGGTATCCTCCTTTTTACGCACCTTTTTGTGATATGTGTTGTTTATGTACTTATGGA AAGTGTGACCTTTTAGGGAAAAAAGGAGCATGTGGAATCAATGCAGAAGCACAACAGGCAAGAACAGTTCTTTTGGCATC ATGCATCGGAACTGCAGCTCATGCGGGGCATGCAAGGCACTTACTGCATCATGTAATACACATGCACGGTAGAGATAAGC CAATAGACCTTGGCAAAAATATTGACATAGAAGCTCCAATTATAAGAACTTTAATTGGTAAAAAACCTGAGACTTTAGGT GACCTTGAAGAATCATTAGCTTACGTTGAAGAACAGTTAACTCACCTTCTTTCTGCATGCCATACGGGTCAGGAAGGAAG TTCTCTTGATTTTGAATCAAAAACATTCCATGCAGGTATTATGGATGACCTTGCAAGAGAAGTTGCAGATATTGCACAAA TTATTGCATACAGGATGTCAAAAGGAGACGGTGATGAGCCATTAGTTGAACTTGGACTTGGAACCGTAAATAAAGATAAA CCTGTAATATTATGTATTGGGCATAACGTAGCACCGGGTGCAGAAATACTTGACTATATCGAAGACAACGATCTTTACGA AGACGTTGAAGTTTGTGGTATATGTTGTACTGCAATAGATATTACAAGATATAATTCGGCTGCAAAGGTTATCGGGCCAC TATCAAAACAGCTTAAATTTATTCGAAGTGGTGTTTCAGACGTTATTGTCGTAGATGAACAGTGCGTTAGAACTGATATA TTAGAAGAAGCTAAAAAGAATGGCGCAGTAGTTATTGCAACAACGGATAAAATGTGCCTTGGACTTCCAGATAAGACTAA GGAAGACTCAGATTTAGTTATAAGTGAATTAGTAAATGGAAAAATTGACGGGGCACTTATTCTTGAACCAAAAAATGTAG GAAAAGTTGCAGTAGAAGTTGCTAAAAAAATTGCAAAAAGAAGAGAAAGTATAAAAGCACTTCCGGACGTTTCAGAAATT TCAAAGCTTGCAAAGGAATGTACTGAATGTGGATGGTGCGTAAGAGTATGTCCAAATAATAGGCCTGTAATGGATGCAGT AACTTCTGCAGCAAAAGGAGACCTTACAAAGCTTGCAAAACTCTATGAAAATGATATGTGTTATGCATGCGGACGATGTG AAGAGGAATGTGAAAGAAAGCTTCCTTTAGTTTCATTTATAACTAAAGCAGGAGACCACCACGTTAAAAATCAAAAATTC AAAATGCGAGCAGGAAGAGGTCCAGTTCAAGACGTTGAAATTAGAAAAGTTGGTGGCCCTATCGTTTTAGGAGATATTCC GGGAGTAGTAGCATTTGTTGGATGTTCAAATTATCCAAATGGCGGCATTGAAATGGCTAAAATGGCTGAAGAGCTATTAA AAAGGAGATATATCGTTGTAGCGACAGGTTGTGCTGCAATGTCAATTGGAGAATACGTTGATGAAGACGGACTTACTCTT TATGAACGATATGAAGGTATTTTTGATGCAGGGGGACTTGCAAATGCGGGTTCTTGTGTTTCAAATGCACACATTTCTGG AGCATGCATAAAAATTGCAAATATTTTTGCTAAAAAGCCACTTTCAGGAAATTTTGAAGAAATTGCAGACTATATTTTGA ATAGGGTTGGGGCATGTGGAGTTGCATGGGGAGCATTTTCTCAAAAAGCAGCAGCAATTGCCGCAGGAGTTAACCGGTGG GGTATTCCTGCAGTTTTAGGGCCACATAGTTCAAAATATAGGCGACTACATCTTGGAAGAATAGATAAAAAGGAATTATG GGATTTAAATGATTTAAGAACTGGGGAAGTAGTTCAAGGGGAACCTGCTCCAGAACATCTACTGTATGCTGCAGAAACAA TGGAAGAAGCAATAGTAAGTATTGTAAAAATGTGTATACGGCCAAATGACACCCCAAAAGGAAGGCAACTAAAACTTTCA CACTATATTGACTTATATAAGAGGTATTTCGGTGAATTACCGCCAGATTTAGAATTATTTGTAAGAAATGAAAGGGACGT TCCAATCACTTACAAACACGACGTAATGGAAAACTTAAAGGAAAAAAAATGGGTTCAAAGGGAAGCTCCAAAAGAACCAT CCTTGCTTTTGAAAAAATAA
Upstream 100 bases:
>100_bases TTAAAATATGCTATTTTTTCACATTTTAGTATCAAGTTTAATGTTAAACTATATATACAAAAAAAAGTCATTATAAATCA TGACAATTCTGGTGATGGTC
Downstream 100 bases:
>100_bases GGTGAAAAAATGGATGGAGATAGAACAACACCTTGGCAGCCAACCGTAATTGCGGGTCCAAAGCATGCAATGCTTTTAAC CCCTGCAATTGCTAAAATGA
Product: acetyl-CoA decarbonylase/synthase complex subunit alpha
Products: NA
Alternate protein names: ACDS complex subunit alpha; ACDS complex carbon monoxide dehydrogenase; ACDS CODH [H]
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYG KCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLG DLEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDI LEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEI SKLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTL YERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRW GIPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK
Sequences:
>Translated_779_residues MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYG KCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLG DLEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDI LEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEI SKLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTL YERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRW GIPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK >Mature_778_residues AFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYGK CDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGD LEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDKP VILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDIL EEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEIS KLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKFK MRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTLY ERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWG IPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLSH YIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]
COG id: COG1152
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004460 - InterPro: IPR016101 - InterPro: IPR012285 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 85480; Mature: 85348
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLL CCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH KRYPPFYAPFCDMCCLCTYGKCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARH HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGDLEESLAYVEEQLTHLLSAC HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH HTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKF CEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IRSGVSDVIVVDEQCVRTDILEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNG HHCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCC KIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEISKLAKECTECGWCVRVCPNN CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCC RPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF CCHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCE KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVV EEECCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEE ATGCAAMSIGEYVDEDGLTLYERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKP EECHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC LSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWGIPAVLGPHSSKYRRLHLGR CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEECCCC IDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS CCHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLL CCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH KRYPPFYAPFCDMCCLCTYGKCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARH HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGDLEESLAYVEEQLTHLLSAC HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH HTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKF CEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IRSGVSDVIVVDEQCVRTDILEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNG HHCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCC KIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEISKLAKECTECGWCVRVCPNN CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCC RPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF CCHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCE KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVV EEECCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEE ATGCAAMSIGEYVDEDGLTLYERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKP EECHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC LSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWGIPAVLGPHSSKYRRLHLGR CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEECCCC IDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS CCHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]