Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is cdhA [H]

Identifier: 150399065

GI number: 150399065

Start: 361148

End: 363487

Strand: Reverse

Name: cdhA [H]

Synonym: Mevan_0311

Alternate gene names: 150399065

Gene position: 363487-361148 (Counterclockwise)

Preceding gene: 150399066

Following gene: 150399064

Centisome position: 21.13

GC content: 37.69

Gene sequence:

>2340_bases
ATGGCATTTGAAAAGACGGCTAAAAAACTTGATGACAATTTTTGGAATACCAAAAATCTTAAAATATCTATTGGAGAAGT
TTCTGATGGTAAATCTGCTAAATCTAAGCTTGATGAACCAATGGGGCCTACGCCAAAACCAAGTGTAACGGATCTTAGAT
CTTGGGATTTTAAATTATTAAAGAGGTATCCTCCTTTTTACGCACCTTTTTGTGATATGTGTTGTTTATGTACTTATGGA
AAGTGTGACCTTTTAGGGAAAAAAGGAGCATGTGGAATCAATGCAGAAGCACAACAGGCAAGAACAGTTCTTTTGGCATC
ATGCATCGGAACTGCAGCTCATGCGGGGCATGCAAGGCACTTACTGCATCATGTAATACACATGCACGGTAGAGATAAGC
CAATAGACCTTGGCAAAAATATTGACATAGAAGCTCCAATTATAAGAACTTTAATTGGTAAAAAACCTGAGACTTTAGGT
GACCTTGAAGAATCATTAGCTTACGTTGAAGAACAGTTAACTCACCTTCTTTCTGCATGCCATACGGGTCAGGAAGGAAG
TTCTCTTGATTTTGAATCAAAAACATTCCATGCAGGTATTATGGATGACCTTGCAAGAGAAGTTGCAGATATTGCACAAA
TTATTGCATACAGGATGTCAAAAGGAGACGGTGATGAGCCATTAGTTGAACTTGGACTTGGAACCGTAAATAAAGATAAA
CCTGTAATATTATGTATTGGGCATAACGTAGCACCGGGTGCAGAAATACTTGACTATATCGAAGACAACGATCTTTACGA
AGACGTTGAAGTTTGTGGTATATGTTGTACTGCAATAGATATTACAAGATATAATTCGGCTGCAAAGGTTATCGGGCCAC
TATCAAAACAGCTTAAATTTATTCGAAGTGGTGTTTCAGACGTTATTGTCGTAGATGAACAGTGCGTTAGAACTGATATA
TTAGAAGAAGCTAAAAAGAATGGCGCAGTAGTTATTGCAACAACGGATAAAATGTGCCTTGGACTTCCAGATAAGACTAA
GGAAGACTCAGATTTAGTTATAAGTGAATTAGTAAATGGAAAAATTGACGGGGCACTTATTCTTGAACCAAAAAATGTAG
GAAAAGTTGCAGTAGAAGTTGCTAAAAAAATTGCAAAAAGAAGAGAAAGTATAAAAGCACTTCCGGACGTTTCAGAAATT
TCAAAGCTTGCAAAGGAATGTACTGAATGTGGATGGTGCGTAAGAGTATGTCCAAATAATAGGCCTGTAATGGATGCAGT
AACTTCTGCAGCAAAAGGAGACCTTACAAAGCTTGCAAAACTCTATGAAAATGATATGTGTTATGCATGCGGACGATGTG
AAGAGGAATGTGAAAGAAAGCTTCCTTTAGTTTCATTTATAACTAAAGCAGGAGACCACCACGTTAAAAATCAAAAATTC
AAAATGCGAGCAGGAAGAGGTCCAGTTCAAGACGTTGAAATTAGAAAAGTTGGTGGCCCTATCGTTTTAGGAGATATTCC
GGGAGTAGTAGCATTTGTTGGATGTTCAAATTATCCAAATGGCGGCATTGAAATGGCTAAAATGGCTGAAGAGCTATTAA
AAAGGAGATATATCGTTGTAGCGACAGGTTGTGCTGCAATGTCAATTGGAGAATACGTTGATGAAGACGGACTTACTCTT
TATGAACGATATGAAGGTATTTTTGATGCAGGGGGACTTGCAAATGCGGGTTCTTGTGTTTCAAATGCACACATTTCTGG
AGCATGCATAAAAATTGCAAATATTTTTGCTAAAAAGCCACTTTCAGGAAATTTTGAAGAAATTGCAGACTATATTTTGA
ATAGGGTTGGGGCATGTGGAGTTGCATGGGGAGCATTTTCTCAAAAAGCAGCAGCAATTGCCGCAGGAGTTAACCGGTGG
GGTATTCCTGCAGTTTTAGGGCCACATAGTTCAAAATATAGGCGACTACATCTTGGAAGAATAGATAAAAAGGAATTATG
GGATTTAAATGATTTAAGAACTGGGGAAGTAGTTCAAGGGGAACCTGCTCCAGAACATCTACTGTATGCTGCAGAAACAA
TGGAAGAAGCAATAGTAAGTATTGTAAAAATGTGTATACGGCCAAATGACACCCCAAAAGGAAGGCAACTAAAACTTTCA
CACTATATTGACTTATATAAGAGGTATTTCGGTGAATTACCGCCAGATTTAGAATTATTTGTAAGAAATGAAAGGGACGT
TCCAATCACTTACAAACACGACGTAATGGAAAACTTAAAGGAAAAAAAATGGGTTCAAAGGGAAGCTCCAAAAGAACCAT
CCTTGCTTTTGAAAAAATAA

Upstream 100 bases:

>100_bases
TTAAAATATGCTATTTTTTCACATTTTAGTATCAAGTTTAATGTTAAACTATATATACAAAAAAAAGTCATTATAAATCA
TGACAATTCTGGTGATGGTC

Downstream 100 bases:

>100_bases
GGTGAAAAAATGGATGGAGATAGAACAACACCTTGGCAGCCAACCGTAATTGCGGGTCCAAAGCATGCAATGCTTTTAAC
CCCTGCAATTGCTAAAATGA

Product: acetyl-CoA decarbonylase/synthase complex subunit alpha

Products: NA

Alternate protein names: ACDS complex subunit alpha; ACDS complex carbon monoxide dehydrogenase; ACDS CODH [H]

Number of amino acids: Translated: 779; Mature: 778

Protein sequence:

>779_residues
MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYG
KCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLG
DLEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK
PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDI
LEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEI
SKLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF
KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTL
YERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRW
GIPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS
HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK

Sequences:

>Translated_779_residues
MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYG
KCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLG
DLEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK
PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDI
LEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEI
SKLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF
KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTL
YERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRW
GIPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS
HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK
>Mature_778_residues
AFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLLKRYPPFYAPFCDMCCLCTYGK
CDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARHLLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGD
LEESLAYVEEQLTHLLSACHTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDKP
VILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKFIRSGVSDVIVVDEQCVRTDIL
EEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNGKIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEIS
KLAKECTECGWCVRVCPNNRPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKFK
MRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVVATGCAAMSIGEYVDEDGLTLY
ERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKPLSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWG
IPAVLGPHSSKYRRLHLGRIDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLSH
YIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]

COG id: COG1152

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004460
- InterPro:   IPR016101
- InterPro:   IPR012285
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 85480; Mature: 85348

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLL
CCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KRYPPFYAPFCDMCCLCTYGKCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARH
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGDLEESLAYVEEQLTHLLSAC
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC
PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKF
CEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IRSGVSDVIVVDEQCVRTDILEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNG
HHCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCC
KIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEISKLAKECTECGWCVRVCPNN
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCC
RPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCE
KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVV
EEECCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEE
ATGCAAMSIGEYVDEDGLTLYERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKP
EECHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC
LSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWGIPAVLGPHSSKYRRLHLGR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEECCCC
IDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS
CCHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK
HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AFEKTAKKLDDNFWNTKNLKISIGEVSDGKSAKSKLDEPMGPTPKPSVTDLRSWDFKLL
CCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KRYPPFYAPFCDMCCLCTYGKCDLLGKKGACGINAEAQQARTVLLASCIGTAAHAGHARH
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLHHVIHMHGRDKPIDLGKNIDIEAPIIRTLIGKKPETLGDLEESLAYVEEQLTHLLSAC
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HTGQEGSSLDFESKTFHAGIMDDLAREVADIAQIIAYRMSKGDGDEPLVELGLGTVNKDK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC
PVILCIGHNVAPGAEILDYIEDNDLYEDVEVCGICCTAIDITRYNSAAKVIGPLSKQLKF
CEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IRSGVSDVIVVDEQCVRTDILEEAKKNGAVVIATTDKMCLGLPDKTKEDSDLVISELVNG
HHCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCC
KIDGALILEPKNVGKVAVEVAKKIAKRRESIKALPDVSEISKLAKECTECGWCVRVCPNN
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCC
RPVMDAVTSAAKGDLTKLAKLYENDMCYACGRCEEECERKLPLVSFITKAGDHHVKNQKF
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCE
KMRAGRGPVQDVEIRKVGGPIVLGDIPGVVAFVGCSNYPNGGIEMAKMAEELLKRRYIVV
EEECCCCCCCCCEEEECCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEE
ATGCAAMSIGEYVDEDGLTLYERYEGIFDAGGLANAGSCVSNAHISGACIKIANIFAKKP
EECHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC
LSGNFEEIADYILNRVGACGVAWGAFSQKAAAIAAGVNRWGIPAVLGPHSSKYRRLHLGR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHEECCCC
IDKKELWDLNDLRTGEVVQGEPAPEHLLYAAETMEEAIVSIVKMCIRPNDTPKGRQLKLS
CCHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
HYIDLYKRYFGELPPDLELFVRNERDVPITYKHDVMENLKEKKWVQREAPKEPSLLLKK
HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]