| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is yraQ [C]
Identifier: 150399053
GI number: 150399053
Start: 351034
End: 351894
Strand: Reverse
Name: yraQ [C]
Synonym: Mevan_0299
Alternate gene names: 150399053
Gene position: 351894-351034 (Counterclockwise)
Preceding gene: 150399054
Following gene: 150399052
Centisome position: 20.46
GC content: 26.95
Gene sequence:
>861_bases ATGATACCAATTAATTCGATAGTTATTTCATTAGAACGCTCTTTTAATTTTTTTATTTCTTCATTTCCGTATATTATTTT AGGGTTTTTAATTTCTGCATACATCAAAATAAAATTAAAGGGAAAGTTAAGGCAAAAGTTTATGCATGTACTTGATAGTT CAAAAAAATCAATAATAATAGCATCAATAATTGGTGCGGTTTTACCGCTTTGCTCTGCAAGTGGCGTTCCAATTGCAAAT GTAATGAATAAAAAAGGTGCAAATTTTGGAATTACAATGTCTTTTATTGTTTCGGCATCATCAATTACCCCATTAGGCCT AATGCTTATATTTTCAATTTTGGGGTCAAAATTAGCAGTTTTACAAATTATTATGTCAATAATTTTGTCATGCATTGTTG GTATCATATTTTACAATGAAAAAATGCCGTTATATACTTTTGAAGAATTTGATATAAAAAAAGAAGAAAACTATTTGTCA ATCCTATATAATCAATCCAAAAATTTAATGCCCCCAATAATTTTTGGATTTTTACTATCTGGATTTTTAATGGAGTTTAT TCCAAAAGATATAATCCTTTATGCCCTTTCAAATAGTCTTATGATGTACTTTTATGTTTCTTTTGCAAGAATTTTTATAT TTTTATGCCCTCATGCACTAATTCCTTTAATAAATTCTGTAAGCGTTAACGGTGTTTCCAATGGATTAATAATCTCATTT TTAATTTCAGCACCTACGCTTGGCCTTCCAATGATTTTTGCATTAAATAAATCTTACGGTAAATATATAACTATAAAATA CATATTATCAGTTATAATTTCCAGTGCATTTCTTGGAATAATTTATGATAGTTTATTTTAG
Upstream 100 bases:
>100_bases TTCTGGTGTAGGTATGCATGCCCATACGGAACAACGATACAGCTTACAAAAAAAGGAATAACCAAAATAAAACAGCACAA GTGTAGCAATTGTGGAAAAC
Downstream 100 bases:
>100_bases TAATTTTTATTTACTTTTAGTAATTTTCAGTATTTATTTTACACTAAATTTCAATCGAAAAAACTATATACTTATTTTTA AATATATTGTTTAATAGGAG
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MIPINSIVISLERSFNFFISSFPYIILGFLISAYIKIKLKGKLRQKFMHVLDSSKKSIIIASIIGAVLPLCSASGVPIAN VMNKKGANFGITMSFIVSASSITPLGLMLIFSILGSKLAVLQIIMSIILSCIVGIIFYNEKMPLYTFEEFDIKKEENYLS ILYNQSKNLMPPIIFGFLLSGFLMEFIPKDIILYALSNSLMMYFYVSFARIFIFLCPHALIPLINSVSVNGVSNGLIISF LISAPTLGLPMIFALNKSYGKYITIKYILSVIISSAFLGIIYDSLF
Sequences:
>Translated_286_residues MIPINSIVISLERSFNFFISSFPYIILGFLISAYIKIKLKGKLRQKFMHVLDSSKKSIIIASIIGAVLPLCSASGVPIAN VMNKKGANFGITMSFIVSASSITPLGLMLIFSILGSKLAVLQIIMSIILSCIVGIIFYNEKMPLYTFEEFDIKKEENYLS ILYNQSKNLMPPIIFGFLLSGFLMEFIPKDIILYALSNSLMMYFYVSFARIFIFLCPHALIPLINSVSVNGVSNGLIISF LISAPTLGLPMIFALNKSYGKYITIKYILSVIISSAFLGIIYDSLF >Mature_286_residues MIPINSIVISLERSFNFFISSFPYIILGFLISAYIKIKLKGKLRQKFMHVLDSSKKSIIIASIIGAVLPLCSASGVPIAN VMNKKGANFGITMSFIVSASSITPLGLMLIFSILGSKLAVLQIIMSIILSCIVGIIFYNEKMPLYTFEEFDIKKEENYLS ILYNQSKNLMPPIIFGFLLSGFLMEFIPKDIILYALSNSLMMYFYVSFARIFIFLCPHALIPLINSVSVNGVSNGLIISF LISAPTLGLPMIFALNKSYGKYITIKYILSVIISSAFLGIIYDSLF
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31783; Mature: 31783
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPINSIVISLERSFNFFISSFPYIILGFLISAYIKIKLKGKLRQKFMHVLDSSKKSIII CCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCCHHHH ASIIGAVLPLCSASGVPIANVMNKKGANFGITMSFIVSASSITPLGLMLIFSILGSKLAV HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCHHHH LQIIMSIILSCIVGIIFYNEKMPLYTFEEFDIKKEENYLSILYNQSKNLMPPIIFGFLLS HHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH GFLMEFIPKDIILYALSNSLMMYFYVSFARIFIFLCPHALIPLINSVSVNGVSNGLIISF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LISAPTLGLPMIFALNKSYGKYITIKYILSVIISSAFLGIIYDSLF HHHCCCCCCHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIPINSIVISLERSFNFFISSFPYIILGFLISAYIKIKLKGKLRQKFMHVLDSSKKSIII CCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCCHHHH ASIIGAVLPLCSASGVPIANVMNKKGANFGITMSFIVSASSITPLGLMLIFSILGSKLAV HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCHHHH LQIIMSIILSCIVGIIFYNEKMPLYTFEEFDIKKEENYLSILYNQSKNLMPPIIFGFLLS HHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH GFLMEFIPKDIILYALSNSLMMYFYVSFARIFIFLCPHALIPLINSVSVNGVSNGLIISF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LISAPTLGLPMIFALNKSYGKYITIKYILSVIISSAFLGIIYDSLF HHHCCCCCCHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA