| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399008
Identifier: 150399008
GI number: 150399008
Start: 297476
End: 297976
Strand: Reverse
Name: 150399008
Synonym: Mevan_0254
Alternate gene names: NA
Gene position: 297976-297476 (Counterclockwise)
Preceding gene: 150399014
Following gene: 150399007
Centisome position: 17.32
GC content: 28.94
Gene sequence:
>501_bases ATGATATCAGTTGCAACATTAGAATGTTTTACCCACGGAAAAATTGGAATTAAAATCCATAAGATGGCTTGCGGATATAA AGAACTTCAAAATGACTTTGGATACGACATTATACGGGGAAACGTGTTGGTAACTGCATCAATGTTTTTACCATCAAAAG AAAGTATTGAATCGCTTTTAAACATGAAATTACCAAAATCTGACCACGAATTTAAATATTCAAAAGCTTACAATGAAGAA AACGATTTAAAAGTAGCTGAATATATTTCAAAAGCGTTAAAGGAAAAATTAAAATGTAATATTGCAATTTCAACTACAGC AGGAGTTGGAAAAGGCGCAATTTCAATATTAACTGATAAAAATAGCTATTTATTTACTTCGGACATTTATGGAAACCTTA TAAAAGGCGAAAATATATTGAAACGACAAGAAAATGCAGTAAATAAGGCTTTTGAGGCATTTATAAAAATATTAAATGAA GAATATAATATAAAGGAGTGA
Upstream 100 bases:
>100_bases ATCAAAGTTTAAATTAATATCATTCATATATAATTTAAAAATAAATTAAAAAAATGATTTTAAGGCTAAATTAAAAATAA ATTAAAACTAAAGGTATATT
Downstream 100 bases:
>100_bases TAAATTGATAGATTCTAAAACAGTACTTCTTGGACTTATTGGCCATCCTGTTGAGCATTCTTTTTCACCAATTATGCACA ATGCTGCAATAAATGACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MISVATLECFTHGKIGIKIHKMACGYKELQNDFGYDIIRGNVLVTASMFLPSKESIESLLNMKLPKSDHEFKYSKAYNEE NDLKVAEYISKALKEKLKCNIAISTTAGVGKGAISILTDKNSYLFTSDIYGNLIKGENILKRQENAVNKAFEAFIKILNE EYNIKE
Sequences:
>Translated_166_residues MISVATLECFTHGKIGIKIHKMACGYKELQNDFGYDIIRGNVLVTASMFLPSKESIESLLNMKLPKSDHEFKYSKAYNEE NDLKVAEYISKALKEKLKCNIAISTTAGVGKGAISILTDKNSYLFTSDIYGNLIKGENILKRQENAVNKAFEAFIKILNE EYNIKE >Mature_166_residues MISVATLECFTHGKIGIKIHKMACGYKELQNDFGYDIIRGNVLVTASMFLPSKESIESLLNMKLPKSDHEFKYSKAYNEE NDLKVAEYISKALKEKLKCNIAISTTAGVGKGAISILTDKNSYLFTSDIYGNLIKGENILKRQENAVNKAFEAFIKILNE EYNIKE
Specific function: Unknown
COG id: COG4016
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0254 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y254_METVS (A6UNU1)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001322775.1 - STRING: A6UNU1 - GeneID: 5324923 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_0254 - eggNOG: arNOG10389 - HOGENOM: HBG539277 - OMA: ECFTHGK - ProtClustDB: PRK00962 - HAMAP: MF_00673 - InterPro: IPR009625 - ProDom: PD021915
Pfam domain/function: PF06787 UPF0254
EC number: NA
Molecular weight: Translated: 18670; Mature: 18670
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVATLECFTHGKIGIKIHKMACGYKELQNDFGYDIIRGNVLVTASMFLPSKESIESLL CCEEEEEEEEECCCCCEEEEEHHCCHHHHHHHCCCEEEECCEEEEEEECCCCHHHHHHHH NMKLPKSDHEFKYSKAYNEENDLKVAEYISKALKEKLKCNIAISTTAGVGKGAISILTDK HCCCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEECC NSYLFTSDIYGNLIKGENILKRQENAVNKAFEAFIKILNEEYNIKE CCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MISVATLECFTHGKIGIKIHKMACGYKELQNDFGYDIIRGNVLVTASMFLPSKESIESLL CCEEEEEEEEECCCCCEEEEEHHCCHHHHHHHCCCEEEECCEEEEEEECCCCHHHHHHHH NMKLPKSDHEFKYSKAYNEENDLKVAEYISKALKEKLKCNIAISTTAGVGKGAISILTDK HCCCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEECC NSYLFTSDIYGNLIKGENILKRQENAVNKAFEAFIKILNEEYNIKE CCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA