| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398871
Identifier: 150398871
GI number: 150398871
Start: 124965
End: 125615
Strand: Reverse
Name: 150398871
Synonym: Mevan_0113
Alternate gene names: NA
Gene position: 125615-124965 (Counterclockwise)
Preceding gene: 150398874
Following gene: 150398870
Centisome position: 7.3
GC content: 30.72
Gene sequence:
>651_bases ATGGCAGTTTTAGATTATTTAATTATAAAATATCCGGATTTAAGACTTAAAATGAGCGATAGCCAAAAAGTTAGGGGTTA CTTTGCAAACAAGTATTCAAGCGAATTGATGTTTCACAATCACGAAAATAAATCATTTTTGTACGGCTATCCAAAAATCC AGTATAAGGTAATCGATAAAATTCCCCATTTAGTCGGAATTTCTGAAGGGGCCATTTTATTAAAAGAAACCGCAGTTAAC GAAGATTCCATTGACGTGGATGGAAAAACCTATATTTCTAAAATCGAAGTGATAAATGAAAAAGCAGAGTTTGGAATATC AAAAATGAATACTTACGAATTTAAAGTACCTTGGATGCCGATAAATCAGGAAAATTTTAAAAAATATGCCGATTCTGATA ACTTTGAAAAAGAAGAGCTTTTAAAAAGAATTTTGGCAGGAAATATTCTTTCAATGGCAAAAGGATTTGAACACACTGTT TCTGAAAGAATATTGTCAGACTTGAATTTGGACGAAATAACTGTTAAATTTAAAAATAAAAACATGGTTGGATTTAAGGG GACTTTTGAGTGTAATTTTAGTATTCCTAATTATTTGGGGCTTGGAAAAAGCGTTTCTAGGGGATTTGGAACGGTTAAAA AAGTTAATTAA
Upstream 100 bases:
>100_bases AAAAAGCAGTTCTGTAAAAAAATTCCAATAATTATATATTTAACGACATTTAAAAAATTTATAGATTTAAATCGAATTTA ACAATCATAAGAGGAATTTT
Downstream 100 bases:
>100_bases AATTAAAACGGATAAACGAGGAGAATAATTTGAAATACCTATTCTTATTGGGCGGACACGACCTTGAAATGGTCGAAATT AGAAATATTTTAGACGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAVLDYLIIKYPDLRLKMSDSQKVRGYFANKYSSELMFHNHENKSFLYGYPKIQYKVIDKIPHLVGISEGAILLKETAVN EDSIDVDGKTYISKIEVINEKAEFGISKMNTYEFKVPWMPINQENFKKYADSDNFEKEELLKRILAGNILSMAKGFEHTV SERILSDLNLDEITVKFKNKNMVGFKGTFECNFSIPNYLGLGKSVSRGFGTVKKVN
Sequences:
>Translated_216_residues MAVLDYLIIKYPDLRLKMSDSQKVRGYFANKYSSELMFHNHENKSFLYGYPKIQYKVIDKIPHLVGISEGAILLKETAVN EDSIDVDGKTYISKIEVINEKAEFGISKMNTYEFKVPWMPINQENFKKYADSDNFEKEELLKRILAGNILSMAKGFEHTV SERILSDLNLDEITVKFKNKNMVGFKGTFECNFSIPNYLGLGKSVSRGFGTVKKVN >Mature_215_residues AVLDYLIIKYPDLRLKMSDSQKVRGYFANKYSSELMFHNHENKSFLYGYPKIQYKVIDKIPHLVGISEGAILLKETAVNE DSIDVDGKTYISKIEVINEKAEFGISKMNTYEFKVPWMPINQENFKKYADSDNFEKEELLKRILAGNILSMAKGFEHTVS ERILSDLNLDEITVKFKNKNMVGFKGTFECNFSIPNYLGLGKSVSRGFGTVKKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1086 N-terminal region [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24780; Mature: 24649
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLDYLIIKYPDLRLKMSDSQKVRGYFANKYSSELMFHNHENKSFLYGYPKIQYKVIDK CCHHHEEHHCCCCEEEEECCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCEEEEHHHH IPHLVGISEGAILLKETAVNEDSIDVDGKTYISKIEVINEKAEFGISKMNTYEFKVPWMP CHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEE INQENFKKYADSDNFEKEELLKRILAGNILSMAKGFEHTVSERILSDLNLDEITVKFKNK CCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC NMVGFKGTFECNFSIPNYLGLGKSVSRGFGTVKKVN CEEEECEEEEECCCCCCHHCCCCHHHHCCCCEEECC >Mature Secondary Structure AVLDYLIIKYPDLRLKMSDSQKVRGYFANKYSSELMFHNHENKSFLYGYPKIQYKVIDK CHHHEEHHCCCCEEEEECCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCEEEEHHHH IPHLVGISEGAILLKETAVNEDSIDVDGKTYISKIEVINEKAEFGISKMNTYEFKVPWMP CHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEE INQENFKKYADSDNFEKEELLKRILAGNILSMAKGFEHTVSERILSDLNLDEITVKFKNK CCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC NMVGFKGTFECNFSIPNYLGLGKSVSRGFGTVKKVN CEEEECEEEEECCCCCCHHCCCCHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]