| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398861
Identifier: 150398861
GI number: 150398861
Start: 113632
End: 114903
Strand: Reverse
Name: 150398861
Synonym: Mevan_0103
Alternate gene names: NA
Gene position: 114903-113632 (Counterclockwise)
Preceding gene: 150398869
Following gene: 150398860
Centisome position: 6.68
GC content: 29.56
Gene sequence:
>1272_bases ATGAAAATAAACCAAATATCTGTAAAAAACCTTTTCGATACAATCGATCACGATATTGTACTAAACGATGAAGGAATTTC AATCATTCACGGGGTAAATGGGATTGGGAAAACCACTTTTTTAAAAATGATATACTCTTGCTTTAACGATAATCCCGAAA AACTGAAAAATTTTATTTTCAAAGAATTTAACGTACATTTTGAAGATAATTCTGTTTTAAACGTTTTAAAAAATGATGAT TCTATTGAATACAATTTTTATTCAAAAACAAAAAAGTTAAACCATTCTTTCAAATTTTTAACTGCAAAAACGAATATTGA TGATCTGAAAAAACTTATAGGATATTTTGAAAATAGCAAAGATACAAATCTGGCTGATGTTTTAAAAAATATCAATTTAA GTGAAAAAAAAGAAGAATTTCCAGAATGGCTCAAAGAACTTTTAAACTCCTGTAAGATTTATTTTATCCACACAAACAGG CTGAATAAAATTTCAGAGTACGAAAAAACAAAATCTCTTGATTTAACGGTTTTAGAGTATTCAAAAGACCTTGTTAAAAA AATCGAAGAAAGACTTAAAAAATACGGTAACCTCTCGGAACAGTTGAATAAAAATTTCCCGATAAATGTGATTCGTTGCA GCATCGAAAACCGGCTGTCTTCAGAAAAAATTACTGAGGAACTCGTAAATCTCGATAAAAGACGTGAAAAATTTGTAAAT TTGGGTATTTTGGATCCAAATGATGATGCGATAATTGATCCTGATGAAGAATTTGATTTAAATAATTTAAAAATTGATGA AAGCGATAGGGACCTGTTTTCAGTTTATTTAAGGGATGCAAATAAAAAACTTGACGTATTTGAAGACCTGTCTGTAAAAC TTGAATTATTAAAACGGATGGTAAATTCGAAATTCATAGATAAAGAATTGGTAATTGACCAAAAAGAAGGATTCGTCTTT AAAAGTTCAAATGGCAAAATATTAACTCCTTCAAACCTTTCTTCAGGGGAGCAGCATGAAATAATTTTACTCTACGAATT ATTGTTTAATATAAATGCTAATTCAGTCGTTTTAATCGATGAACCGGAACTTTCACTTCACGTTTCATGGCAGCAGCAGT TTTTAAGGGATTTAATTGAAATAAATGCCATTAAAAATTTTGAAATAATAATTGCAACACATTCCCCACAAATTATCCAC AACCGATGGGATTTAACCGTGGGACTTGGTGACGATGAAGAGGATGAAGAATATTTTGAAGGTGATTTCTAG
Upstream 100 bases:
>100_bases CAGGATATCAAAAATTCTTAGAAAAAATAAAACGAATTATATAAATAATTATAACTCCCCTTATTTAATTTAATAAAAAA CAATTGGAATCGGGATAATT
Downstream 100 bases:
>100_bases TGCGAAAGCATCTGACTGATGATGATGTATTAAACGGCATCAAGATGGCTAGAAGAGCACACAAAAAAATACCTGCTCTT TTTGAAGGGAGTACTGACAT
Product: ATPase
Products: NA
Alternate protein names: Excinuclease ATPase Subunit; AAA ATPase; Conserved Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKINQISVKNLFDTIDHDIVLNDEGISIIHGVNGIGKTTFLKMIYSCFNDNPEKLKNFIFKEFNVHFEDNSVLNVLKNDD SIEYNFYSKTKKLNHSFKFLTAKTNIDDLKKLIGYFENSKDTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNR LNKISEYEKTKSLDLTVLEYSKDLVKKIEERLKKYGNLSEQLNKNFPINVIRCSIENRLSSEKITEELVNLDKRREKFVN LGILDPNDDAIIDPDEEFDLNNLKIDESDRDLFSVYLRDANKKLDVFEDLSVKLELLKRMVNSKFIDKELVIDQKEGFVF KSSNGKILTPSNLSSGEQHEIILLYELLFNINANSVVLIDEPELSLHVSWQQQFLRDLIEINAIKNFEIIIATHSPQIIH NRWDLTVGLGDDEEDEEYFEGDF
Sequences:
>Translated_423_residues MKINQISVKNLFDTIDHDIVLNDEGISIIHGVNGIGKTTFLKMIYSCFNDNPEKLKNFIFKEFNVHFEDNSVLNVLKNDD SIEYNFYSKTKKLNHSFKFLTAKTNIDDLKKLIGYFENSKDTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNR LNKISEYEKTKSLDLTVLEYSKDLVKKIEERLKKYGNLSEQLNKNFPINVIRCSIENRLSSEKITEELVNLDKRREKFVN LGILDPNDDAIIDPDEEFDLNNLKIDESDRDLFSVYLRDANKKLDVFEDLSVKLELLKRMVNSKFIDKELVIDQKEGFVF KSSNGKILTPSNLSSGEQHEIILLYELLFNINANSVVLIDEPELSLHVSWQQQFLRDLIEINAIKNFEIIIATHSPQIIH NRWDLTVGLGDDEEDEEYFEGDF >Mature_423_residues MKINQISVKNLFDTIDHDIVLNDEGISIIHGVNGIGKTTFLKMIYSCFNDNPEKLKNFIFKEFNVHFEDNSVLNVLKNDD SIEYNFYSKTKKLNHSFKFLTAKTNIDDLKKLIGYFENSKDTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNR LNKISEYEKTKSLDLTVLEYSKDLVKKIEERLKKYGNLSEQLNKNFPINVIRCSIENRLSSEKITEELVNLDKRREKFVN LGILDPNDDAIIDPDEEFDLNNLKIDESDRDLFSVYLRDANKKLDVFEDLSVKLELLKRMVNSKFIDKELVIDQKEGFVF KSSNGKILTPSNLSSGEQHEIILLYELLFNINANSVVLIDEPELSLHVSWQQQFLRDLIEINAIKNFEIIIATHSPQIIH NRWDLTVGLGDDEEDEEYFEGDF
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49383; Mature: 49383
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINQISVKNLFDTIDHDIVLNDEGISIIHGVNGIGKTTFLKMIYSCFNDNPEKLKNFIF CCCCHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHH KEFNVHFEDNSVLNVLKNDDSIEYNFYSKTKKLNHSFKFLTAKTNIDDLKKLIGYFENSK HHHEEEECCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCC DTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNRLNKISEYEKTKSLDLTVLEY CCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCEEEEHHH SKDLVKKIEERLKKYGNLSEQLNKNFPINVIRCSIENRLSSEKITEELVNLDKRREKFVN HHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHE LGILDPNDDAIIDPDEEFDLNNLKIDESDRDLFSVYLRDANKKLDVFEDLSVKLELLKRM EEEECCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VNSKFIDKELVIDQKEGFVFKSSNGKILTPSNLSSGEQHEIILLYELLFNINANSVVLID HHHHCCCHHHEEECCCCEEEECCCCCEECCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEE EPELSLHVSWQQQFLRDLIEINAIKNFEIIIATHSPQIIHNRWDLTVGLGDDEEDEEYFE CCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCEEEEEECCCCCCCHHHHC GDF CCC >Mature Secondary Structure MKINQISVKNLFDTIDHDIVLNDEGISIIHGVNGIGKTTFLKMIYSCFNDNPEKLKNFIF CCCCHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHH KEFNVHFEDNSVLNVLKNDDSIEYNFYSKTKKLNHSFKFLTAKTNIDDLKKLIGYFENSK HHHEEEECCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCC DTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNRLNKISEYEKTKSLDLTVLEY CCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCEEEEHHH SKDLVKKIEERLKKYGNLSEQLNKNFPINVIRCSIENRLSSEKITEELVNLDKRREKFVN HHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHE LGILDPNDDAIIDPDEEFDLNNLKIDESDRDLFSVYLRDANKKLDVFEDLSVKLELLKRM EEEECCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VNSKFIDKELVIDQKEGFVFKSSNGKILTPSNLSSGEQHEIILLYELLFNINANSVVLID HHHHCCCHHHEEECCCCEEEECCCCCEECCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEE EPELSLHVSWQQQFLRDLIEINAIKNFEIIIATHSPQIIHNRWDLTVGLGDDEEDEEYFE CCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCEEEEEECCCCCCCHHHHC GDF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA