| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398849
Identifier: 150398849
GI number: 150398849
Start: 97624
End: 98421
Strand: Reverse
Name: 150398849
Synonym: Mevan_0090
Alternate gene names: NA
Gene position: 98421-97624 (Counterclockwise)
Preceding gene: 150398854
Following gene: 150398848
Centisome position: 5.72
GC content: 24.06
Gene sequence:
>798_bases ATGAAATTAGATGAATATATTTGTTCAAAAATTAATTATGCTGAAATTGCAAAAATAAAATGTTTTATTGGGGATTTATA TTCTAATTCACATATTAAAACTTTTTGGAACGTTTTAGAATGGTTAGAACATAATATTTCATACGATATTGAAAAATCCA ATTCAATAGTTGTTAAAAATTCACAAAACCTTCAAACCCCTTTTGAAACAATAATACTAAAAAAAGGAATTTGTTTAGAT TATTCTATACTTATTATGGCCATTTTATTAAATTTTGGTTATGATAACTTTTATTTATGTACGATAAAAAGCAGATTCAA AAAAACGGAACATAGTGTAATCGTATTAAAATATGATAATAATTTCTTAGTTCTTGATAATAAATTGCCATTAATTAGTT TCGAAGATTATATTTCAGGTTTGACTATTAATGGCAATATTATTGAAGATATCGGATATTACCTCATTCAAAACTTTAAT CAAGACTATTCTATAAAAAAAATAGGGTGTACAAAAGAGTTAACATCTATAAGATCTTCAGACTCAAAGATTCCAATTAA TATTATCGAGAGACATTTGCACATATACTTAAGAAAAAAAGGATGGGAACCAGCATGTACTGAAAACCTTAAAAACATTG ATGAACGGAATTTTTTGATATATTATGATGTATCCATTCATAATAATATTATATCTTATATATGCGATTCAATAAGCCAT AATAAACATCCTGGAAAATATATTTTGAAACTGGTGAAGATTGGAAACTTTCTTAAGGTTTATTTTATATTTAATTAG
Upstream 100 bases:
>100_bases TTATTAAATAATTCATTTCCCCTTATGGCATACTTTTTAGGCCTGCCAAGTAATTTATAGAATAACTTTGATAAATTGAT CAAGTAATCACCGGGATATT
Downstream 100 bases:
>100_bases TTCTTATTTTCGAAAAACGTTATAATCCTATGATAAAAATGATTTATCAGTAGGGCCCTATTCTTTTCATATCTTTTTAA ATAATTATAATTGTCCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKLDEYICSKINYAEIAKIKCFIGDLYSNSHIKTFWNVLEWLEHNISYDIEKSNSIVVKNSQNLQTPFETIILKKGICLD YSILIMAILLNFGYDNFYLCTIKSRFKKTEHSVIVLKYDNNFLVLDNKLPLISFEDYISGLTINGNIIEDIGYYLIQNFN QDYSIKKIGCTKELTSIRSSDSKIPINIIERHLHIYLRKKGWEPACTENLKNIDERNFLIYYDVSIHNNIISYICDSISH NKHPGKYILKLVKIGNFLKVYFIFN
Sequences:
>Translated_265_residues MKLDEYICSKINYAEIAKIKCFIGDLYSNSHIKTFWNVLEWLEHNISYDIEKSNSIVVKNSQNLQTPFETIILKKGICLD YSILIMAILLNFGYDNFYLCTIKSRFKKTEHSVIVLKYDNNFLVLDNKLPLISFEDYISGLTINGNIIEDIGYYLIQNFN QDYSIKKIGCTKELTSIRSSDSKIPINIIERHLHIYLRKKGWEPACTENLKNIDERNFLIYYDVSIHNNIISYICDSISH NKHPGKYILKLVKIGNFLKVYFIFN >Mature_265_residues MKLDEYICSKINYAEIAKIKCFIGDLYSNSHIKTFWNVLEWLEHNISYDIEKSNSIVVKNSQNLQTPFETIILKKGICLD YSILIMAILLNFGYDNFYLCTIKSRFKKTEHSVIVLKYDNNFLVLDNKLPLISFEDYISGLTINGNIIEDIGYYLIQNFN QDYSIKKIGCTKELTSIRSSDSKIPINIIERHLHIYLRKKGWEPACTENLKNIDERNFLIYYDVSIHNNIISYICDSISH NKHPGKYILKLVKIGNFLKVYFIFN
Specific function: Unknown
COG id: COG1800
COG function: function code R; Predicted transglutaminase-like proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0252 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007562 [H]
Pfam domain/function: PF04473 DUF553 [H]
EC number: NA
Molecular weight: Translated: 31072; Mature: 31072
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDEYICSKINYAEIAKIKCFIGDLYSNSHIKTFWNVLEWLEHNISYDIEKSNSIVVKN CCCHHHHHCCCCHHHHHEEEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEC SQNLQTPFETIILKKGICLDYSILIMAILLNFGYDNFYLCTIKSRFKKTEHSVIVLKYDN CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCEEEEEECC NFLVLDNKLPLISFEDYISGLTINGNIIEDIGYYLIQNFNQDYSIKKIGCTKELTSIRSS CEEEECCCCCEEEHHHHHCCEEECCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCC DSKIPINIIERHLHIYLRKKGWEPACTENLKNIDERNFLIYYDVSIHNNIISYICDSISH CCCCCHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCC NKHPGKYILKLVKIGNFLKVYFIFN CCCCHHHHHHHHHHCCEEEEEEEEC >Mature Secondary Structure MKLDEYICSKINYAEIAKIKCFIGDLYSNSHIKTFWNVLEWLEHNISYDIEKSNSIVVKN CCCHHHHHCCCCHHHHHEEEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEC SQNLQTPFETIILKKGICLDYSILIMAILLNFGYDNFYLCTIKSRFKKTEHSVIVLKYDN CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCEEEEEECC NFLVLDNKLPLISFEDYISGLTINGNIIEDIGYYLIQNFNQDYSIKKIGCTKELTSIRSS CEEEECCCCCEEEHHHHHCCEEECCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCC DSKIPINIIERHLHIYLRKKGWEPACTENLKNIDERNFLIYYDVSIHNNIISYICDSISH CCCCCHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCC NKHPGKYILKLVKIGNFLKVYFIFN CCCCHHHHHHHHHHCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]