| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is napA [H]
Identifier: 150398815
GI number: 150398815
Start: 55010
End: 56176
Strand: Reverse
Name: napA [H]
Synonym: Mevan_0056
Alternate gene names: 150398815
Gene position: 56176-55010 (Counterclockwise)
Preceding gene: 150398816
Following gene: 150398810
Centisome position: 3.27
GC content: 27.93
Gene sequence:
>1167_bases TTGGAACTTTCTTGGGTGCTTTTTACTATTGGAATATTTCTGATTCTTGGAAAAATTGGAAACGAAATAATGTGGCGAAT CGGGCTTCCAAGTGTTTTTGGGGAATTACTTGTTGGTATAATCTTTGGAAATCTTTTATTTTTTGGAATAATTGATCCAA AATACATAACTATTCATGAAAATGAAGTTTTTAGTTTTTTATCAACTCTTGGAATAATGTTTCTTTTGTTTTTAAGTGGG CTTGAAATAGACATACATAAAATTAAAAAAACAGAAGGGATATCTATTATAACCGCACTTCTTGGCGTGGTTTTTCCATT AATTTTAGGATATATTATTCTTTCAAATTTTGGATATACCAGTAAAGAATCAGTTATTGGCGGAGTAATTCTTACTGCAA CTAGTATAGGCATAACTACACGACTTTTAATGGATTTAAATGTTTTAAAAACCGATGTAGGTGCTGTAGCCATTAGTGCA AGCATTATTGATGATTTTTTAGGGATTATTCTTTTAATTGTAGTGATTGGTTCTGGAAATTTATTTGAAATTGCTGGAAA AATTATATTATTTTTTATATTAACCGGGTATTTAGGCTTTAAATTAATTAAAAAATATATAAATTTAGCTGAAAAATTGC ACATTGAAAAAAGTGTTTTATCATTTACACTCGGATTAATGTTTTTATTTTCTTTTTTATCCCAAAACTGGTTTGACGTT GCAATTGAAGGTGCGTTTATGGCTGGTTTAATATTATCGAAAACTTCAGAAGGAAAAATGCTTTCAAAAGAATTGAAATC TATTGGAAATTCGTTTTTAATCCCTTTATTTTTTATATATACTGGAGCAAAACTTAATTTATACGCATTTTTAAATTTTG ATGCCCTCTTTCTTTCAGCAATATTTATTATTGTTGGAGTATTCAGTAAATTTTTAGGCTGGGGAATTGGAGCAAAAGTA TTTGGAAAATGGAATCTTAAAGAAGCATTACAACTTGCTTCAACATCAGTTCCAAGGGCAGAAATTGCGCTAATTAACTT AATGATTGCAGTTACTGCCGGAATAATTTTGGAAAAAAATATATCAACATTTATTGCTGCAACATTGATATTTATAATGT TTACAATAATTTTAACACCATTTTTATTTAAAAAAGTATTTAGATAA
Upstream 100 bases:
>100_bases GTTACTTGCAGTAGTAAATGATGAAAATAGGCTTATAGGAGAAATAAGTCTTAGGATTTTAATAAATAAGTTTTTAGAAC TATGTTTTTAAGGTGTTTTT
Downstream 100 bases:
>100_bases GTAATAAAATCGAGTAATTTATATTTAAAAAATAATTATAATTACTAAATATTATAGTATTTTTTCAGCTAAAAGTTCTG AAATTGACTCATAAATTTTT
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MELSWVLFTIGIFLILGKIGNEIMWRIGLPSVFGELLVGIIFGNLLFFGIIDPKYITIHENEVFSFLSTLGIMFLLFLSG LEIDIHKIKKTEGISIITALLGVVFPLILGYIILSNFGYTSKESVIGGVILTATSIGITTRLLMDLNVLKTDVGAVAISA SIIDDFLGIILLIVVIGSGNLFEIAGKIILFFILTGYLGFKLIKKYINLAEKLHIEKSVLSFTLGLMFLFSFLSQNWFDV AIEGAFMAGLILSKTSEGKMLSKELKSIGNSFLIPLFFIYTGAKLNLYAFLNFDALFLSAIFIIVGVFSKFLGWGIGAKV FGKWNLKEALQLASTSVPRAEIALINLMIAVTAGIILEKNISTFIAATLIFIMFTIILTPFLFKKVFR
Sequences:
>Translated_388_residues MELSWVLFTIGIFLILGKIGNEIMWRIGLPSVFGELLVGIIFGNLLFFGIIDPKYITIHENEVFSFLSTLGIMFLLFLSG LEIDIHKIKKTEGISIITALLGVVFPLILGYIILSNFGYTSKESVIGGVILTATSIGITTRLLMDLNVLKTDVGAVAISA SIIDDFLGIILLIVVIGSGNLFEIAGKIILFFILTGYLGFKLIKKYINLAEKLHIEKSVLSFTLGLMFLFSFLSQNWFDV AIEGAFMAGLILSKTSEGKMLSKELKSIGNSFLIPLFFIYTGAKLNLYAFLNFDALFLSAIFIIVGVFSKFLGWGIGAKV FGKWNLKEALQLASTSVPRAEIALINLMIAVTAGIILEKNISTFIAATLIFIMFTIILTPFLFKKVFR >Mature_388_residues MELSWVLFTIGIFLILGKIGNEIMWRIGLPSVFGELLVGIIFGNLLFFGIIDPKYITIHENEVFSFLSTLGIMFLLFLSG LEIDIHKIKKTEGISIITALLGVVFPLILGYIILSNFGYTSKESVIGGVILTATSIGITTRLLMDLNVLKTDVGAVAISA SIIDDFLGIILLIVVIGSGNLFEIAGKIILFFILTGYLGFKLIKKYINLAEKLHIEKSVLSFTLGLMFLFSFLSQNWFDV AIEGAFMAGLILSKTSEGKMLSKELKSIGNSFLIPLFFIYTGAKLNLYAFLNFDALFLSAIFIIVGVFSKFLGWGIGAKV FGKWNLKEALQLASTSVPRAEIALINLMIAVTAGIILEKNISTFIAATLIFIMFTIILTPFLFKKVFR
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=400, Percent_Identity=25, Blast_Score=73, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 42742; Mature: 42742
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSWVLFTIGIFLILGKIGNEIMWRIGLPSVFGELLVGIIFGNLLFFGIIDPKYITIHE CCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC NEVFSFLSTLGIMFLLFLSGLEIDIHKIKKTEGISIITALLGVVFPLILGYIILSNFGYT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SKESVIGGVILTATSIGITTRLLMDLNVLKTDVGAVAISASIIDDFLGIILLIVVIGSGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LFEIAGKIILFFILTGYLGFKLIKKYINLAEKLHIEKSVLSFTLGLMFLFSFLSQNWFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AIEGAFMAGLILSKTSEGKMLSKELKSIGNSFLIPLFFIYTGAKLNLYAFLNFDALFLSA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHH IFIIVGVFSKFLGWGIGAKVFGKWNLKEALQLASTSVPRAEIALINLMIAVTAGIILEKN HHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC ISTFIAATLIFIMFTIILTPFLFKKVFR HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELSWVLFTIGIFLILGKIGNEIMWRIGLPSVFGELLVGIIFGNLLFFGIIDPKYITIHE CCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC NEVFSFLSTLGIMFLLFLSGLEIDIHKIKKTEGISIITALLGVVFPLILGYIILSNFGYT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SKESVIGGVILTATSIGITTRLLMDLNVLKTDVGAVAISASIIDDFLGIILLIVVIGSGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LFEIAGKIILFFILTGYLGFKLIKKYINLAEKLHIEKSVLSFTLGLMFLFSFLSQNWFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AIEGAFMAGLILSKTSEGKMLSKELKSIGNSFLIPLFFIYTGAKLNLYAFLNFDALFLSA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHH IFIIVGVFSKFLGWGIGAKVFGKWNLKEALQLASTSVPRAEIALINLMIAVTAGIILEKN HHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC ISTFIAATLIFIMFTIILTPFLFKKVFR HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]