| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is sspA [C]
Identifier: 150398719
GI number: 150398719
Start: 3743087
End: 3743779
Strand: Reverse
Name: sspA [C]
Synonym: Smed_3535
Alternate gene names: 150398719
Gene position: 3743779-3743087 (Counterclockwise)
Preceding gene: 150398721
Following gene: 150398718
Centisome position: 98.99
GC content: 62.48
Gene sequence:
>693_bases ATGCCGACACTGTATCATCACCCCATGTCCCCAGCTTCGCGGTTCGTACGCCTTATTCTCTCAGAATATGGCTATCAGAC GGAGCTGAGCGAAGAACAGCCATGGGAGAACCGGCGTGACTTCCTGACGCTGAACCCTGCCGGTACGCTCCCTGTCTATG TCGACGACAGCATGCGCGCGCTCTGCGGCGCCACGATCATCTCCGAATATCTCGACGAGACCAGCGGCATCATGAAGCGC GACCGCCGCCTTCTTGCGGAGGACCCGTTTCAGCGCGCCGAGATCCGCCGGCTCGCCGAATGGTTCCTGCACAAGATGGA AGCCGACGTAACGCGCCCGCTGGTGCGTGAGCGCATCTTCAAGCTGCAGATGACTCCGGACCAGGGCGGCGGCGCGCCGG ATTCGAAGGTTCTGCGCACCTCGCGCAGCAATATCCGCCAGCATATGAAGTATCTCTCCTGGCTCGCCGGATCGCGTCCC TGGCTTGCCGGCGACCGCATCTCCTATGCGGACCTCGCTGCCGCCGCGGCAATTTCCGTGCTCGACTATCTTGGAGAAAT CGACTGGGCCGATGCGCCGGCCGCCAAGGAATGGTACCAGCGGCTGAAGTCGCGTCCATCCTTCCGGCCTCTGCTCGCCG AGCGCGTGCGCGGCGTGACCCCGGTCTCACATTATGCGGATCTCGACTTTTAA
Upstream 100 bases:
>100_bases TTTGCCACCGCAACTACCTATAGCTCCTTGTAACGAGCCGTGGCCAGTTGCATATGCCGCGACGCCAATATCCCCGAAAA CAGCTGTAATCTGATCATCG
Downstream 100 bases:
>100_bases GGACGCAATCATGCCCGGCAACGCCGCAGAAGCGGAGATCCAGGGCAGGAAACGACGGACCCTCACCGCCTTCCTGAAGG AGGAAGCTGCGGCCAAGGGG
Product: glutathione S-transferase domain-containing protein
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Unkown Function; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S- Transferase N-Terminal
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPTLYHHPMSPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRALCGATIISEYLDETSGIMKR DRRLLAEDPFQRAEIRRLAEWFLHKMEADVTRPLVRERIFKLQMTPDQGGGAPDSKVLRTSRSNIRQHMKYLSWLAGSRP WLAGDRISYADLAAAAAISVLDYLGEIDWADAPAAKEWYQRLKSRPSFRPLLAERVRGVTPVSHYADLDF
Sequences:
>Translated_230_residues MPTLYHHPMSPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRALCGATIISEYLDETSGIMKR DRRLLAEDPFQRAEIRRLAEWFLHKMEADVTRPLVRERIFKLQMTPDQGGGAPDSKVLRTSRSNIRQHMKYLSWLAGSRP WLAGDRISYADLAAAAAISVLDYLGEIDWADAPAAKEWYQRLKSRPSFRPLLAERVRGVTPVSHYADLDF >Mature_229_residues PTLYHHPMSPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRALCGATIISEYLDETSGIMKRD RRLLAEDPFQRAEIRRLAEWFLHKMEADVTRPLVRERIFKLQMTPDQGGGAPDSKVLRTSRSNIRQHMKYLSWLAGSRPW LAGDRISYADLAAAAAISVLDYLGEIDWADAPAAKEWYQRLKSRPSFRPLLAERVRGVTPVSHYADLDF
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 26443; Mature: 26312
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLYHHPMSPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECHHHHH LCGATIISEYLDETSGIMKRDRRLLAEDPFQRAEIRRLAEWFLHKMEADVTRPLVRERIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLQMTPDQGGGAPDSKVLRTSRSNIRQHMKYLSWLAGSRPWLAGDRISYADLAAAAAISV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LDYLGEIDWADAPAAKEWYQRLKSRPSFRPLLAERVRGVTPVSHYADLDF HHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure PTLYHHPMSPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECHHHHH LCGATIISEYLDETSGIMKRDRRLLAEDPFQRAEIRRLAEWFLHKMEADVTRPLVRERIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLQMTPDQGGGAPDSKVLRTSRSNIRQHMKYLSWLAGSRPWLAGDRISYADLAAAAAISV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LDYLGEIDWADAPAAKEWYQRLKSRPSFRPLLAERVRGVTPVSHYADLDF HHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA