| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mtnN [H]
Identifier: 150398702
GI number: 150398702
Start: 3721085
End: 3721723
Strand: Reverse
Name: mtnN [H]
Synonym: Smed_3518
Alternate gene names: 150398702
Gene position: 3721723-3721085 (Counterclockwise)
Preceding gene: 150398703
Following gene: 150398701
Centisome position: 98.41
GC content: 64.79
Gene sequence:
>639_bases ATGAGCTTCGAGCTGAAGCCGGTGGCCGGAAGAAAGATCCTCTATGTGATGGCAGTGGACGCCGAATACGGTCCTTGTCT CCGCGAGAGGATGGCGCCGCTGATGACGGGTGTCGGTCCGGTCGAAGCAGCCGTCAGCCTGACCAGGGCGCTGGCGGAGC TCGAAGCGAAGGGTACCCTGCCGGACCTCGTCGTCTCACTGGGGTCGGCCGGCTCCGCGACGCTCGAACAGACCGAAGTC TACCAGGCGGCCTCGGTCGCTTATCGCGATATGGACGCCTCACCGCTCGGCTTCGAAAAGGGCGCAACGCCTTTCCTCGG CCTTCCGGCCGTCATAGACCTGCCGCTCACCGTTCCCGGGGTGAAACAGGCGCGACTTTCGACCGGCGCCGCAATCGTCT CCGGCGCCGCCTATGCGGCCATCGACGCCGACATGGTGGAGATGGAGACCTTCGCGGTACTGCGCGCCTGCCAGGCCTTC GGCGTGCCGCTCATCGGGTTGCGCGGCATTTCGGACGGCAAGGCGGAGCTGAAGCATATCGGCGACTGGACCGAATATCT GCACGTGATCGACGAGAAGCTCGCAGCTACGATCGATCGGCTCGAGACCGCGTTGGAGACCGGCGAAATCAGGCTCTGA
Upstream 100 bases:
>100_bases ACGGGCGCGGCTATGCGGTCAGGCCCGACGGGCCCGCCAAGCTCATCGCCTCGATGACCGGAACGATGATGGTGGTCCGC GGACGCGAGGGGATCGAAGG
Downstream 100 bases:
>100_bases GCCTTCTTTAGAGGACGCTTGATTGTCCGGGTGCAATGTTATCGTTGCGCCAGCGGCGGGCATTCATTAAAGGCTCGCCA TGATCAAGCTTGCTTGAAGG
Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSFELKPVAGRKILYVMAVDAEYGPCLRERMAPLMTGVGPVEAAVSLTRALAELEAKGTLPDLVVSLGSAGSATLEQTEV YQAASVAYRDMDASPLGFEKGATPFLGLPAVIDLPLTVPGVKQARLSTGAAIVSGAAYAAIDADMVEMETFAVLRACQAF GVPLIGLRGISDGKAELKHIGDWTEYLHVIDEKLAATIDRLETALETGEIRL
Sequences:
>Translated_212_residues MSFELKPVAGRKILYVMAVDAEYGPCLRERMAPLMTGVGPVEAAVSLTRALAELEAKGTLPDLVVSLGSAGSATLEQTEV YQAASVAYRDMDASPLGFEKGATPFLGLPAVIDLPLTVPGVKQARLSTGAAIVSGAAYAAIDADMVEMETFAVLRACQAF GVPLIGLRGISDGKAELKHIGDWTEYLHVIDEKLAATIDRLETALETGEIRL >Mature_211_residues SFELKPVAGRKILYVMAVDAEYGPCLRERMAPLMTGVGPVEAAVSLTRALAELEAKGTLPDLVVSLGSAGSATLEQTEVY QAASVAYRDMDASPLGFEKGATPFLGLPAVIDLPLTVPGVKQARLSTGAAIVSGAAYAAIDADMVEMETFAVLRACQAFG VPLIGLRGISDGKAELKHIGDWTEYLHVIDEKLAATIDRLETALETGEIRL
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 22349; Mature: 22218
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFELKPVAGRKILYVMAVDAEYGPCLRERMAPLMTGVGPVEAAVSLTRALAELEAKGTL CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH PDLVVSLGSAGSATLEQTEVYQAASVAYRDMDASPLGFEKGATPFLGLPAVIDLPLTVPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC VKQARLSTGAAIVSGAAYAAIDADMVEMETFAVLRACQAFGVPLIGLRGISDGKAELKHI CHHHHHHCCHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH GDWTEYLHVIDEKLAATIDRLETALETGEIRL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SFELKPVAGRKILYVMAVDAEYGPCLRERMAPLMTGVGPVEAAVSLTRALAELEAKGTL CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH PDLVVSLGSAGSATLEQTEVYQAASVAYRDMDASPLGFEKGATPFLGLPAVIDLPLTVPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC VKQARLSTGAAIVSGAAYAAIDADMVEMETFAVLRACQAFGVPLIGLRGISDGKAELKHI CHHHHHHCCHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH GDWTEYLHVIDEKLAATIDRLETALETGEIRL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA