Click here to switch to the map view.

The map label for this gene is 150398682

Identifier: 150398682

GI number: 150398682

Start: 3703194

End: 3703655

Strand: Reverse

Name: 150398682

Synonym: Smed_3496

Alternate gene names: NA

Gene position: 3703655-3703194 (Counterclockwise)

Preceding gene: 150398686

Following gene: 150398680

Centisome position: 97.93

GC content: 62.99

Gene sequence:

>462_bases
ATGACCCCGACGGTTCAGCATCTGCCCATCGACAACCGATGGAGAACAGACATGCTCGATCTTTCCAACCGCCCACTCCT
CAACAAAGCATTCCTCGCCGACGGGATTTTCTCGCTGATCGCCGGATCGGTTCTGATCGTCGCCGCCGCCCCCGTAGCCG
CACTTGCCAGCCCCGGGCTTCCGCCCGAAGTGATTATGGCACTCGGCGCAGGGCTCCTCGCCTGGGGTGCCTTCCATCTG
GCTGCGGCCAGAAAAGGAGGACCGAACACGATCGCAACCCGGATCAGCATTGCCGGCGACGTCCTCTGGCAGATCGCCAG
CCTCGCCATTCTTGCATCGGCCCATTCGGCGCTGACCATCGCCGGAATAGCGCTGATCGCCATGGCCATGGTCGGCGTCG
CCGACTTCCTGTTTTTCAAGATGCGGGGAGCGTCGCAGGCGCGGCTGTTCCAGGCTGCATGA

Upstream 100 bases:

>100_bases
CTTCAGACGGCTGCCGAATTCCATAGATGTCCTCTCTGTTGCACCGGCAGACTCGCCCGAACATGGCCCAGAATCCATTA
CCTCAGAGGTAATTGGTTTA

Downstream 100 bases:

>100_bases
AAGAATGGCCCGGCGCCATGTGCGCCGGGCTCATCTTGCGTGGGCTCAGACCGGCTCCCAGCCGTCCCTTTCGCTGGCCC
GATAGATCGCGTCTATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTPTVQHLPIDNRWRTDMLDLSNRPLLNKAFLADGIFSLIAGSVLIVAAAPVAALASPGLPPEVIMALGAGLLAWGAFHL
AAARKGGPNTIATRISIAGDVLWQIASLAILASAHSALTIAGIALIAMAMVGVADFLFFKMRGASQARLFQAA

Sequences:

>Translated_153_residues
MTPTVQHLPIDNRWRTDMLDLSNRPLLNKAFLADGIFSLIAGSVLIVAAAPVAALASPGLPPEVIMALGAGLLAWGAFHL
AAARKGGPNTIATRISIAGDVLWQIASLAILASAHSALTIAGIALIAMAMVGVADFLFFKMRGASQARLFQAA
>Mature_152_residues
TPTVQHLPIDNRWRTDMLDLSNRPLLNKAFLADGIFSLIAGSVLIVAAAPVAALASPGLPPEVIMALGAGLLAWGAFHLA
AARKGGPNTIATRISIAGDVLWQIASLAILASAHSALTIAGIALIAMAMVGVADFLFFKMRGASQARLFQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15839; Mature: 15708

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTVQHLPIDNRWRTDMLDLSNRPLLNKAFLADGIFSLIAGSVLIVAAAPVAALASPGL
CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPEVIMALGAGLLAWGAFHLAAARKGGPNTIATRISIAGDVLWQIASLAILASAHSALTI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIALIAMAMVGVADFLFFKMRGASQARLFQAA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
TPTVQHLPIDNRWRTDMLDLSNRPLLNKAFLADGIFSLIAGSVLIVAAAPVAALASPGL
CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPEVIMALGAGLLAWGAFHLAAARKGGPNTIATRISIAGDVLWQIASLAILASAHSALTI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIALIAMAMVGVADFLFFKMRGASQARLFQAA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA