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The map label for this gene is yfiS [H]

Identifier: 150398623

GI number: 150398623

Start: 3641836

End: 3643491

Strand: Reverse

Name: yfiS [H]

Synonym: Smed_3437

Alternate gene names: 150398623

Gene position: 3643491-3641836 (Counterclockwise)

Preceding gene: 150398634

Following gene: 150398617

Centisome position: 96.34

GC content: 64.37

Gene sequence:

>1656_bases
ATGAAGATCAACCGAAAGAGATCAGAGGTGACGAACCGCACATCGCCGTTGGCTCCCTTCAGGCACGACATCTTCCGCAC
GATCTGGATCGCGAGCCTTGCTTCCAATTTCGGCGGGCTGATCCAGGCCGTGGGTGCGGCCTGGCTCATGACGTCCATTT
CGCAATCGGTGAACATGGTGGCGCTGGTGCAGGCCTCGACCTCGCTGCCGATCATGCTCTTCTCACTCGTTTCCGGCGCG
CTTGCCGACAATTTCGACCGGCGGCGGATCATGCTCGTCGCTCAGAGCTTCATGCTCGCCGTTTCGGGGCTGCTTACCGT
CTGCGCCTATTACGGTATCGTTACGCCGTGGCTTCTGCTCATCTTCACCTTTCTTCTCGGCTGCGGCACGGCTTTGAACA
ATCCATCCTGGCAGGCTTCGGTCGGCGACATGGTTCCGCGTGACGACCTGCCGGCAGCGGTGGCGCTGAACAGCATGGGA
TTCAATCTGACCCGCAGCGTCGGCCCGGCGATCGGCGGCGCGATCGTCGCAGCCGCGGGTGCCGCGGCCGCCTTCGCCGC
CAACACACTCAGCTATTTCGCGATCCTGTTCGCGCTTGCCCGATGGAAACCGGTAACCCCGGAAAACCGGCTGCCGCGCG
AGACGCTCGGGCGCGCCGTTTCCGCGGGCCTGCGCTACGTGGCGATGTCGCCCAATATCGGCAAGGTGCTCGTGCGCGGC
TTCGCCTTCGGCCTTTCGGCGAGCGCCATTCTCGCCCTGCTGCCGCTGGTGGCGCGCGACCTCGTCGGCGGCGGGCCGCT
CACTTACGGCGTCATGCTCGGCGCCTTCGGCCTCGGCGCGATCGGCGGCGCGCTTTTGAGCGCAAGGCTGAGGGAATTCC
TCACGAGCGAGGCGATCGTGCGTTATGCCTTTGCCGGCTTCGCCTTCAGCGCATTGGTCACAGCCATTAGTTCGGAAGCC
TGGCTGACCTGTCTCGTGCTCGCTGTTTCCGGCGCGTGCTGGGTGCTGGCGCTTTCGCTCTTCAACACCACGGTGCAGCT
TTCGACACCGCGCTGGGTCGTCGGCCGGGCGCTTTCGCTCTATCAGACGATGACCTTCGGCGGGATCGCCGGCGGCAGTT
GGCTGTGGGGTGTCACCGCCGAACAATACGGCGCAGCCAACGCGCTCATCGGCTCCTGTCTTCTGATGCTCGTGGGGGCG
GCGATCGGACTGCGCTTCGCCCTGCCGGAGTTCAAGTCGCTCAACCTCGACCCGCTCAACCGCTTCAACGAACCGCTGCT
CGAACTCGACCTGAAGCCGCGCAGCGGGCCGATCGTCGTCATGATCGATTACGATATCGCCGATAACGACATACCCGAAT
TCCTGAAGACCATGGCCGAGCGGCGGCGCATCCGCATCCGTGACGGGGCCGGGCATTGGGCGCTCATGCGCGACCTCGAA
AACCCGACGACCTGGACCGAGACTTATCACGTGCCGACCTGGGTCGAATATGTCCGCCACAATCAGCGCCGTACCCAGGC
CGACGCCGCCATTGGGGACAAGCTGACCGCACTCCATCGGGGACCGAACCCGCCGCGGGTGCACCGCATGATCGAGCGGC
AGACGATCGTTCCCGACCATTACGAGCGCTACAAGCGATCCGTCGAGATGCACTGA

Upstream 100 bases:

>100_bases
ATTGCAAGGGTCGCGGAGGCGGGCGTGGGAGCTTTCGGCCGGATCGCAAGTTTCAGCGTCTGGCGCATCGCAAATCGAGG
TTTATAACGAAGCCATCGAC

Downstream 100 bases:

>100_bases
GCGGGGGTCGGAGGGTGGGAATGCCCCTCAACCGGCTGCCGTCACCTTCTCCCCGCAGGCGGGGCGAAGGGAAATGCCGC
GATCGCTCGCTCGCTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKINRKRSEVTNRTSPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMVALVQASTSLPIMLFSLVSGA
LADNFDRRRIMLVAQSFMLAVSGLLTVCAYYGIVTPWLLLIFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMG
FNLTRSVGPAIGGAIVAAAGAAAAFAANTLSYFAILFALARWKPVTPENRLPRETLGRAVSAGLRYVAMSPNIGKVLVRG
FAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGLGAIGGALLSARLREFLTSEAIVRYAFAGFAFSALVTAISSEA
WLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSLYQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLVGA
AIGLRFALPEFKSLNLDPLNRFNEPLLELDLKPRSGPIVVMIDYDIADNDIPEFLKTMAERRRIRIRDGAGHWALMRDLE
NPTTWTETYHVPTWVEYVRHNQRRTQADAAIGDKLTALHRGPNPPRVHRMIERQTIVPDHYERYKRSVEMH

Sequences:

>Translated_551_residues
MKINRKRSEVTNRTSPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMVALVQASTSLPIMLFSLVSGA
LADNFDRRRIMLVAQSFMLAVSGLLTVCAYYGIVTPWLLLIFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMG
FNLTRSVGPAIGGAIVAAAGAAAAFAANTLSYFAILFALARWKPVTPENRLPRETLGRAVSAGLRYVAMSPNIGKVLVRG
FAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGLGAIGGALLSARLREFLTSEAIVRYAFAGFAFSALVTAISSEA
WLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSLYQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLVGA
AIGLRFALPEFKSLNLDPLNRFNEPLLELDLKPRSGPIVVMIDYDIADNDIPEFLKTMAERRRIRIRDGAGHWALMRDLE
NPTTWTETYHVPTWVEYVRHNQRRTQADAAIGDKLTALHRGPNPPRVHRMIERQTIVPDHYERYKRSVEMH
>Mature_551_residues
MKINRKRSEVTNRTSPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMVALVQASTSLPIMLFSLVSGA
LADNFDRRRIMLVAQSFMLAVSGLLTVCAYYGIVTPWLLLIFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMG
FNLTRSVGPAIGGAIVAAAGAAAAFAANTLSYFAILFALARWKPVTPENRLPRETLGRAVSAGLRYVAMSPNIGKVLVRG
FAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGLGAIGGALLSARLREFLTSEAIVRYAFAGFAFSALVTAISSEA
WLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSLYQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLVGA
AIGLRFALPEFKSLNLDPLNRFNEPLLELDLKPRSGPIVVMIDYDIADNDIPEFLKTMAERRRIRIRDGAGHWALMRDLE
NPTTWTETYHVPTWVEYVRHNQRRTQADAAIGDKLTALHRGPNPPRVHRMIERQTIVPDHYERYKRSVEMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 59785; Mature: 59785

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS01234 GATB ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRKRSEVTNRTSPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMV
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ALVQASTSLPIMLFSLVSGALADNFDRRRIMLVAQSFMLAVSGLLTVCAYYGIVTPWLLL
EEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMGFNLTRSVGPAIGGAIVAAAG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AAAAFAANTLSYFAILFALARWKPVTPENRLPRETLGRAVSAGLRYVAMSPNIGKVLVRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHH
FAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGLGAIGGALLSARLREFLTSEAIV
HHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYAFAGFAFSALVTAISSEAWLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCHHHHHHHHHH
YQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLVGAAIGLRFALPEFKSLNLDPLN
HHHHHHCCCCCCCEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHH
RFNEPLLELDLKPRSGPIVVMIDYDIADNDIPEFLKTMAERRRIRIRDGAGHWALMRDLE
HCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHCC
NPTTWTETYHVPTWVEYVRHNQRRTQADAAIGDKLTALHRGPNPPRVHRMIERQTIVPDH
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH
YERYKRSVEMH
HHHHHHHCCCC
>Mature Secondary Structure
MKINRKRSEVTNRTSPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMV
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ALVQASTSLPIMLFSLVSGALADNFDRRRIMLVAQSFMLAVSGLLTVCAYYGIVTPWLLL
EEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMGFNLTRSVGPAIGGAIVAAAG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AAAAFAANTLSYFAILFALARWKPVTPENRLPRETLGRAVSAGLRYVAMSPNIGKVLVRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHH
FAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGLGAIGGALLSARLREFLTSEAIV
HHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYAFAGFAFSALVTAISSEAWLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCHHHHHHHHHH
YQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLVGAAIGLRFALPEFKSLNLDPLN
HHHHHHCCCCCCCEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHH
RFNEPLLELDLKPRSGPIVVMIDYDIADNDIPEFLKTMAERRRIRIRDGAGHWALMRDLE
HCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHCC
NPTTWTETYHVPTWVEYVRHNQRRTQADAAIGDKLTALHRGPNPPRVHRMIERQTIVPDH
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH
YERYKRSVEMH
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]