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The map label for this gene is nudC [H]

Identifier: 150398616

GI number: 150398616

Start: 3634952

End: 3635932

Strand: Reverse

Name: nudC [H]

Synonym: Smed_3430

Alternate gene names: 150398616

Gene position: 3635932-3634952 (Counterclockwise)

Preceding gene: 150398617

Following gene: 150398612

Centisome position: 96.14

GC content: 64.83

Gene sequence:

>981_bases
ATGACGAAAACGATCTTCGACCTTCACAGCCCGCACCCGGAGCCAAGCACGCTCGTCGCCTTCGCGGAGAACCACCTGGA
CCGCCGGTCCGAGCATCGGCCGGATGACTGCGTCGAGGCGGCGCTTAAGCATCCCGGTGCCCATTTCCTGGCTTTTTCCG
GAGCGAAGCTGATCGTCAAGCACGACGAGAAGATCATCGATCCGCTGTTCGCCCCCTATGAACTGGCGGGGCTCGAGCCG
ACCATGGACGATGCGGTCCTGCTTGGATTTCTGCCGAACGGCGAGCCGCGTATTGCCGTCCCTTCGGGGCTTACCGAGGA
GACCGTTCCGGAGCCCTTCAAGATAGCCGACGCCCGCATGCTCTATCGCCAGCAGATGCTGCCGGAGGAATTGCTGGGTC
AGTTCGCTCAAGGGTCGAGCCTGATCGTATGGAACGCCAACAACCGGTTCTGCGGCCGCTGCGGGGGCCCGATGGATGGT
GCCGGCGGAGGTTATCGGCGCATCTGTACCGCATGCGGGCATTTGGTCTTCCCCCGGACCGACCCGGTGGTCATCATGCT
GACGATCGACCTCGAGCGTGATCAATGCCTACTCGGCCGCAGTCCGCATTTCGCGCCGGGCATGTATTCCTGCCTCGCCG
GTTTCGTCGAACCGGGCGAGACGATCGAAAACGCGGTGCGGCGGGAAACGCTCGAGGAGTCCGGTATCCGCATCGGCCGC
GTGCGCTATCACGCCTCACAGCCCTGGCCGCTCCCCCATTCGCTGATGATCGGCTGCTACGCGGAAGCGAGGTCGACCGC
CATCAAGCGCGACGAGCAGGAACTGGAGGATGTTCGCTGGTTCACGCGGGCGGAAACCGAAGCGATGCTGGAGCGCGCCA
CCGGCGTCGCCGACACGGGAGACGAGCACATTCCGCCGCCGAAGGGCGCGATTGCGCACCAGCTCATGCGCGACTGGCTC
GCCTGGCCCGAGCGCGACTGA

Upstream 100 bases:

>100_bases
CGAACTGGCCGGGGCCCGTCTGGGGTTTCGGCAGGGCCGAGCCCTGGCCGGAGGAGGACCACAGGGCATTCGCAGCCAGC
ATCATGGAAAATCTCTGAGC

Downstream 100 bases:

>100_bases
GAGCAGCCTAGTGATCTTGCCCAGAAGACACCGAGCGGCTCTGGGCAACGGCATCACTGAAACGCTCACACCCCGCACGG
AGGCGGGGTGTGGAAGACTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTKTIFDLHSPHPEPSTLVAFAENHLDRRSEHRPDDCVEAALKHPGAHFLAFSGAKLIVKHDEKIIDPLFAPYELAGLEP
TMDDAVLLGFLPNGEPRIAVPSGLTEETVPEPFKIADARMLYRQQMLPEELLGQFAQGSSLIVWNANNRFCGRCGGPMDG
AGGGYRRICTACGHLVFPRTDPVVIMLTIDLERDQCLLGRSPHFAPGMYSCLAGFVEPGETIENAVRRETLEESGIRIGR
VRYHASQPWPLPHSLMIGCYAEARSTAIKRDEQELEDVRWFTRAETEAMLERATGVADTGDEHIPPPKGAIAHQLMRDWL
AWPERD

Sequences:

>Translated_326_residues
MTKTIFDLHSPHPEPSTLVAFAENHLDRRSEHRPDDCVEAALKHPGAHFLAFSGAKLIVKHDEKIIDPLFAPYELAGLEP
TMDDAVLLGFLPNGEPRIAVPSGLTEETVPEPFKIADARMLYRQQMLPEELLGQFAQGSSLIVWNANNRFCGRCGGPMDG
AGGGYRRICTACGHLVFPRTDPVVIMLTIDLERDQCLLGRSPHFAPGMYSCLAGFVEPGETIENAVRRETLEESGIRIGR
VRYHASQPWPLPHSLMIGCYAEARSTAIKRDEQELEDVRWFTRAETEAMLERATGVADTGDEHIPPPKGAIAHQLMRDWL
AWPERD
>Mature_325_residues
TKTIFDLHSPHPEPSTLVAFAENHLDRRSEHRPDDCVEAALKHPGAHFLAFSGAKLIVKHDEKIIDPLFAPYELAGLEPT
MDDAVLLGFLPNGEPRIAVPSGLTEETVPEPFKIADARMLYRQQMLPEELLGQFAQGSSLIVWNANNRFCGRCGGPMDGA
GGGYRRICTACGHLVFPRTDPVVIMLTIDLERDQCLLGRSPHFAPGMYSCLAGFVEPGETIENAVRRETLEESGIRIGRV
RYHASQPWPLPHSLMIGCYAEARSTAIKRDEQELEDVRWFTRAETEAMLERATGVADTGDEHIPPPKGAIAHQLMRDWLA
WPERD

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=341, Percent_Identity=36.950146627566, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI50593112, Length=321, Percent_Identity=31.4641744548287, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI48994995, Length=187, Percent_Identity=33.6898395721925, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71986510, Length=216, Percent_Identity=34.2592592592593, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI212645999, Length=216, Percent_Identity=34.2592592592593, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321371, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 36310; Mature: 36179

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTIFDLHSPHPEPSTLVAFAENHLDRRSEHRPDDCVEAALKHPGAHFLAFSGAKLIVK
CCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEE
HDEKIIDPLFAPYELAGLEPTMDDAVLLGFLPNGEPRIAVPSGLTEETVPEPFKIADARM
CCHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEECCCCCCHHCCCCCHHHHHHHH
LYRQQMLPEELLGQFAQGSSLIVWNANNRFCGRCGGPMDGAGGGYRRICTACGHLVFPRT
HHHHHCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCEECCCC
DPVVIMLTIDLERDQCLLGRSPHFAPGMYSCLAGFVEPGETIENAVRRETLEESGIRIGR
CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEE
VRYHASQPWPLPHSLMIGCYAEARSTAIKRDEQELEDVRWFTRAETEAMLERATGVADTG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DEHIPPPKGAIAHQLMRDWLAWPERD
CCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKTIFDLHSPHPEPSTLVAFAENHLDRRSEHRPDDCVEAALKHPGAHFLAFSGAKLIVK
CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEE
HDEKIIDPLFAPYELAGLEPTMDDAVLLGFLPNGEPRIAVPSGLTEETVPEPFKIADARM
CCHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEECCCCCCHHCCCCCHHHHHHHH
LYRQQMLPEELLGQFAQGSSLIVWNANNRFCGRCGGPMDGAGGGYRRICTACGHLVFPRT
HHHHHCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCEECCCC
DPVVIMLTIDLERDQCLLGRSPHFAPGMYSCLAGFVEPGETIENAVRRETLEESGIRIGR
CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEE
VRYHASQPWPLPHSLMIGCYAEARSTAIKRDEQELEDVRWFTRAETEAMLERATGVADTG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DEHIPPPKGAIAHQLMRDWLAWPERD
CCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA