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The map label for this gene is 150398535

Identifier: 150398535

GI number: 150398535

Start: 3546580

End: 3547164

Strand: Reverse

Name: 150398535

Synonym: Smed_3346

Alternate gene names: NA

Gene position: 3547164-3546580 (Counterclockwise)

Preceding gene: 150398536

Following gene: 150398534

Centisome position: 93.79

GC content: 61.88

Gene sequence:

>585_bases
ATGGGGTGCATGCATGCGCGTAGACAGTCGCCGTTCCGTACCCTTCGCCGTCTGCTGCGGGATCGGCGCGGCGCCGGTGC
CGTGGAATTCGCCATTGTCGCGCCGCTTCTGATTGCCGCCTATATCGGCGCCTTCGAGCTTTCGCTCGGCTTCACCGTCG
CGAGAAAGGTGTCGCGCGCCTCGAGTGCGGTGAGCGATATCGTCACCACCGGGCAGCAGGTGAACAAGGCCTTTCTGGAC
GATATGCGGAACGTCGCTAAAAACATGTTGGTGCCCTATGACAGCTCCGACTACGAGCTCAAAATCACCGGCATACAGGT
GGACGGTACGACGGAAGGCAGGGTCGCCTGGTCCCGGGCCTGGTCGGATGCGAGCAATAGCGCCACGGTTCCCTACGCAC
TCAATTCGGTCGTCAGCGTTCCGGCCGATCTCGACGCGGTGAATGCCTTCGTCGTGCGAACGGAACTCGTCGTGAACCAT
CAGCTTTCCCTGTTCGGCTCGGACGCCGGCGCCATGATCCCCCTTTCCCGGACCTCCTACTATCGTCAGCGCTTCGGCAC
GACCATCAAATGCACGGACTGCTGA

Upstream 100 bases:

>100_bases
CCCCTGGTGACCAAGCTGAGATCGGCCGGCGAGAGCATGCCGCGCGATTATCTGATGGTCGCAACGGCGACGTTCCGCAA
TGAAAACTATTGAGGTCGCC

Downstream 100 bases:

>100_bases
GGCCCTTCCCGGGGCCCTCGCACCTGCTGCACACTGCCGGGCGACATACATCAATTGCAATGGATAAAACGGCGCGCTAT
TCCTGCCGGATTGTGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Pilus Assembly Protein Contains TadE Domain; Transmembrane Protein

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGCMHARRQSPFRTLRRLLRDRRGAGAVEFAIVAPLLIAAYIGAFELSLGFTVARKVSRASSAVSDIVTTGQQVNKAFLD
DMRNVAKNMLVPYDSSDYELKITGIQVDGTTEGRVAWSRAWSDASNSATVPYALNSVVSVPADLDAVNAFVVRTELVVNH
QLSLFGSDAGAMIPLSRTSYYRQRFGTTIKCTDC

Sequences:

>Translated_194_residues
MGCMHARRQSPFRTLRRLLRDRRGAGAVEFAIVAPLLIAAYIGAFELSLGFTVARKVSRASSAVSDIVTTGQQVNKAFLD
DMRNVAKNMLVPYDSSDYELKITGIQVDGTTEGRVAWSRAWSDASNSATVPYALNSVVSVPADLDAVNAFVVRTELVVNH
QLSLFGSDAGAMIPLSRTSYYRQRFGTTIKCTDC
>Mature_193_residues
GCMHARRQSPFRTLRRLLRDRRGAGAVEFAIVAPLLIAAYIGAFELSLGFTVARKVSRASSAVSDIVTTGQQVNKAFLDD
MRNVAKNMLVPYDSSDYELKITGIQVDGTTEGRVAWSRAWSDASNSATVPYALNSVVSVPADLDAVNAFVVRTELVVNHQ
LSLFGSDAGAMIPLSRTSYYRQRFGTTIKCTDC

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21159; Mature: 21028

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCMHARRQSPFRTLRRLLRDRRGAGAVEFAIVAPLLIAAYIGAFELSLGFTVARKVSRA
CCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAVSDIVTTGQQVNKAFLDDMRNVAKNMLVPYDSSDYELKITGIQVDGTTEGRVAWSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEHHH
WSDASNSATVPYALNSVVSVPADLDAVNAFVVRTELVVNHQLSLFGSDAGAMIPLSRTSY
HCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECHHHHH
YRQRFGTTIKCTDC
HHHHCCCEEEEECC
>Mature Secondary Structure 
GCMHARRQSPFRTLRRLLRDRRGAGAVEFAIVAPLLIAAYIGAFELSLGFTVARKVSRA
CCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAVSDIVTTGQQVNKAFLDDMRNVAKNMLVPYDSSDYELKITGIQVDGTTEGRVAWSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEHHH
WSDASNSATVPYALNSVVSVPADLDAVNAFVVRTELVVNHQLSLFGSDAGAMIPLSRTSY
HCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECHHHHH
YRQRFGTTIKCTDC
HHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA