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The map label for this gene is yrbE [H]

Identifier: 150398514

GI number: 150398514

Start: 3522324

End: 3523397

Strand: Reverse

Name: yrbE [H]

Synonym: Smed_3325

Alternate gene names: 150398514

Gene position: 3523397-3522324 (Counterclockwise)

Preceding gene: 150398515

Following gene: 150398513

Centisome position: 93.16

GC content: 61.36

Gene sequence:

>1074_bases
ATGAGCGTGAAGACAGTTGCCATCATCGGCTGCGGCATCGGGCGTTCGCACATTGTCGAGGGCTATCAGCCGCACCCGGA
CAGGTTCCGCGTCCAGGCACTTTGCGATCTCAACGAGGAACGGATGAACGAGGTCGGCGACGAATTCGGCATCGAACAGC
GGACGCGGTCCTTCGACGAACTGCTTGCCGACGACGGCATCGACATCATCGACATCTGCACCCCACCCGGCATCCACCTC
GAACAGGTGCTCGCGGCTCTCGCCGCCGGCAAGCACGTGATCTGCGAGAAGCCGCTGACCGGATCGCTCAAGGGCGTCGA
TGCGATCATGGAAGCCGAGAAGCAGGCAAGCGGCGTGCTGATGCCGATTTTCCAGTATCGCTACGGCGACGGCATCGAGA
AAGCAAAACGCATCATCGATGCGGGCATTGCCGGAAAGCCCTATGTCGGCTCGGTCGAAACTTTCTGGCTGCGCACGCCG
GAATATTATTCCGTGCCCTGGCGGGGCAAATGGGCAACGGAGCTCGGCGGTGTGCTCGTCACCCATGCGCTGCACCTGCA
TGACATGATGCTGCACCTTCTCGGCCCGGTGGCGCGCGTGTTCGGCCGGGTCGCGACGCGCGTCAACGACATAGAAGTCG
AGGATTGCGCCTCCGCGAGCCTGCTGATGAAGAACGGCGCCTTCGTTTCACTCTCCTGCACGCTCGGCTCGCAGGAACAG
ATCAGCCGGCTCAGGCTGCATTTCGAAAACGTGACTTTCGAAAGCAGCCACGAACCCTACGCGCCCGGTAAAGACCCGTG
GAAGATCATCGCGGCCAATAGCGAAGTCCAGGCCCGGATCGACGATGTGATCGGCGACTGGCGTCCGGTCTCGCCGCGAT
TCACGACGCAGATGGCACATTTCCACGATTTCCTGGGCGGAAAAGCGCCGCTGCCGGTGACGACGCAGGATGCGCGTCGC
GCGCTGGAACTGGTGACGGCGATCTATCAGTCCGCAGATACCGGTCGAGAAATAGAACTACCGCTTGGGCCGGAAAGTCC
GAAATATGCCGATTGGCGAGCGATTACCCGATAG

Upstream 100 bases:

>100_bases
CGTACCGAAACCGCGATGCAGCAGGAGCGCTGCTTCAAAGCCATGGAACTCGCGCTTCAAGCGCAGGCGATCGCCGAGCT
GAACGGAGGCAGGAACTGAC

Downstream 100 bases:

>100_bases
GGCCGCAGGGGAGGAGTTTGACATGGCGACGAGCGTCGTTCTTCAAAAGGTCGAAAAGCGTTATGGCGCGTTCGACGTGA
TCCACGGCATCGACCTGACC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSVKTVAIIGCGIGRSHIVEGYQPHPDRFRVQALCDLNEERMNEVGDEFGIEQRTRSFDELLADDGIDIIDICTPPGIHL
EQVLAALAAGKHVICEKPLTGSLKGVDAIMEAEKQASGVLMPIFQYRYGDGIEKAKRIIDAGIAGKPYVGSVETFWLRTP
EYYSVPWRGKWATELGGVLVTHALHLHDMMLHLLGPVARVFGRVATRVNDIEVEDCASASLLMKNGAFVSLSCTLGSQEQ
ISRLRLHFENVTFESSHEPYAPGKDPWKIIAANSEVQARIDDVIGDWRPVSPRFTTQMAHFHDFLGGKAPLPVTTQDARR
ALELVTAIYQSADTGREIELPLGPESPKYADWRAITR

Sequences:

>Translated_357_residues
MSVKTVAIIGCGIGRSHIVEGYQPHPDRFRVQALCDLNEERMNEVGDEFGIEQRTRSFDELLADDGIDIIDICTPPGIHL
EQVLAALAAGKHVICEKPLTGSLKGVDAIMEAEKQASGVLMPIFQYRYGDGIEKAKRIIDAGIAGKPYVGSVETFWLRTP
EYYSVPWRGKWATELGGVLVTHALHLHDMMLHLLGPVARVFGRVATRVNDIEVEDCASASLLMKNGAFVSLSCTLGSQEQ
ISRLRLHFENVTFESSHEPYAPGKDPWKIIAANSEVQARIDDVIGDWRPVSPRFTTQMAHFHDFLGGKAPLPVTTQDARR
ALELVTAIYQSADTGREIELPLGPESPKYADWRAITR
>Mature_356_residues
SVKTVAIIGCGIGRSHIVEGYQPHPDRFRVQALCDLNEERMNEVGDEFGIEQRTRSFDELLADDGIDIIDICTPPGIHLE
QVLAALAAGKHVICEKPLTGSLKGVDAIMEAEKQASGVLMPIFQYRYGDGIEKAKRIIDAGIAGKPYVGSVETFWLRTPE
YYSVPWRGKWATELGGVLVTHALHLHDMMLHLLGPVARVFGRVATRVNDIEVEDCASASLLMKNGAFVSLSCTLGSQEQI
SRLRLHFENVTFESSHEPYAPGKDPWKIIAANSEVQARIDDVIGDWRPVSPRFTTQMAHFHDFLGGKAPLPVTTQDARRA
LELVTAIYQSADTGREIELPLGPESPKYADWRAITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=360, Percent_Identity=25.5555555555556, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323975, Length=273, Percent_Identity=26.7399267399267, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39500; Mature: 39368

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKTVAIIGCGIGRSHIVEGYQPHPDRFRVQALCDLNEERMNEVGDEFGIEQRTRSFDE
CCCEEEEEEECCCCHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH
LLADDGIDIIDICTPPGIHLEQVLAALAAGKHVICEKPLTGSLKGVDAIMEAEKQASGVL
HHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEE
MPIFQYRYGDGIEKAKRIIDAGIAGKPYVGSVETFWLRTPEYYSVPWRGKWATELGGVLV
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHH
THALHLHDMMLHLLGPVARVFGRVATRVNDIEVEDCASASLLMKNGAFVSLSCTLGSQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCEEEEEECCCCHHH
ISRLRLHFENVTFESSHEPYAPGKDPWKIIAANSEVQARIDDVIGDWRPVSPRFTTQMAH
HHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHH
FHDFLGGKAPLPVTTQDARRALELVTAIYQSADTGREIELPLGPESPKYADWRAITR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVKTVAIIGCGIGRSHIVEGYQPHPDRFRVQALCDLNEERMNEVGDEFGIEQRTRSFDE
CCEEEEEEECCCCHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH
LLADDGIDIIDICTPPGIHLEQVLAALAAGKHVICEKPLTGSLKGVDAIMEAEKQASGVL
HHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEE
MPIFQYRYGDGIEKAKRIIDAGIAGKPYVGSVETFWLRTPEYYSVPWRGKWATELGGVLV
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHH
THALHLHDMMLHLLGPVARVFGRVATRVNDIEVEDCASASLLMKNGAFVSLSCTLGSQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCEEEEEECCCCHHH
ISRLRLHFENVTFESSHEPYAPGKDPWKIIAANSEVQARIDDVIGDWRPVSPRFTTQMAH
HHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHH
FHDFLGGKAPLPVTTQDARRALELVTAIYQSADTGREIELPLGPESPKYADWRAITR
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]