Click here to switch to the map view.

The map label for this gene is 150398490

Identifier: 150398490

GI number: 150398490

Start: 3491458

End: 3491775

Strand: Reverse

Name: 150398490

Synonym: Smed_3300

Alternate gene names: NA

Gene position: 3491775-3491458 (Counterclockwise)

Preceding gene: 150398492

Following gene: 150398489

Centisome position: 92.33

GC content: 57.55

Gene sequence:

>318_bases
ATGGAAGCGACACTCAGCAAGCTCAGCGAAGATGCGAGCTTCAGCCAGCGTATCGATGCAATGCACAGACGTGACCGCGT
CTGCCTGACAGCCTTCGTCGTGGTCCTATGGTGCACTCTGCTCTTTGCGCTGTTTACCGTATGGCCCTACATCGCAACTC
CGGCCATTACGGTCATCCTGACAGTCGCCTGCGGCCTGGTGCTGCTCTTCAATACGGCCGCCATCGTCGCGATGCTGCGC
CACTACGAGGAAGACAAGCACTTCATCTACAGCCTCGATCTCAAGCATCTCGATGAGATGCGCTCTTTCGGCCGCTAG

Upstream 100 bases:

>100_bases
GCCGGACATTCCTGTCAGGCAAATAATTTTTCTAAGCAGAATAAGAGGGTTCACAGCGAAATACCGAAACTCGAGTCTAC
TTGGAGGAGGAGGCAAGCCA

Downstream 100 bases:

>100_bases
GAGGTATCATGTCGTACGAACCTCCGAAACAGAGCTTTGCAGGTCAGATTTTCGATGTGGCCACATTGCTCGTTCTCACC
ATCGGGGCGCTTTATATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEATLSKLSEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFALFTVWPYIATPAITVILTVACGLVLLFNTAAIVAMLR
HYEEDKHFIYSLDLKHLDEMRSFGR

Sequences:

>Translated_105_residues
MEATLSKLSEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFALFTVWPYIATPAITVILTVACGLVLLFNTAAIVAMLR
HYEEDKHFIYSLDLKHLDEMRSFGR
>Mature_105_residues
MEATLSKLSEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFALFTVWPYIATPAITVILTVACGLVLLFNTAAIVAMLR
HYEEDKHFIYSLDLKHLDEMRSFGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12039; Mature: 12039

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATLSKLSEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFALFTVWPYIATPAITVIL
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVACGLVLLFNTAAIVAMLRHYEEDKHFIYSLDLKHLDEMRSFGR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEATLSKLSEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFALFTVWPYIATPAITVIL
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVACGLVLLFNTAAIVAMLRHYEEDKHFIYSLDLKHLDEMRSFGR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA