| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398475
Identifier: 150398475
GI number: 150398475
Start: 3477266
End: 3477499
Strand: Reverse
Name: 150398475
Synonym: Smed_3285
Alternate gene names: NA
Gene position: 3477499-3477266 (Counterclockwise)
Preceding gene: 150398476
Following gene: 150398472
Centisome position: 91.95
GC content: 60.26
Gene sequence:
>234_bases ATGGCGACGCGCGACCTTTCCGGCCTGAACGCCTTGGTCATCGGCCGTTTCAATCTTCGGAGCCCCGTTCCGGAGGCTTT TTGCTTGACGTTTATCGTTGTGTCATTTGGTTGCGGGAACACGCGCGACAGGCTTCATGCAAGACCTGTTGCGCGCGGCA GCTGTGCGCCCGTTCCGCACCAGACGTCGCAATGCGCAGAACCGGCAGAAATGCTGCCCCTCCTCAGCCAATGA
Upstream 100 bases:
>100_bases GATCATCGTGCTGCGCGGCTTTGCCGAAAGCCTCTGGGACGACCTTACCCGAATGGGCCTGGAATTCAGCTGAATCCTTA CGCCCGTCCGAGGAGCAAAC
Downstream 100 bases:
>100_bases TCCACCCGTCGCGCTGCACTATGTCATGACGATACGGGGTGCGTTGTCCGCCCAGCTGAAATGAACATTGTCGCCTTGCC GAAAGGGCTGCGCGACAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MATRDLSGLNALVIGRFNLRSPVPEAFCLTFIVVSFGCGNTRDRLHARPVARGSCAPVPHQTSQCAEPAEMLPLLSQ
Sequences:
>Translated_77_residues MATRDLSGLNALVIGRFNLRSPVPEAFCLTFIVVSFGCGNTRDRLHARPVARGSCAPVPHQTSQCAEPAEMLPLLSQ >Mature_76_residues ATRDLSGLNALVIGRFNLRSPVPEAFCLTFIVVSFGCGNTRDRLHARPVARGSCAPVPHQTSQCAEPAEMLPLLSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8294; Mature: 8163
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRDLSGLNALVIGRFNLRSPVPEAFCLTFIVVSFGCGNTRDRLHARPVARGSCAPVPH CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QTSQCAEPAEMLPLLSQ CCCCCCCHHHHHHCCCC >Mature Secondary Structure ATRDLSGLNALVIGRFNLRSPVPEAFCLTFIVVSFGCGNTRDRLHARPVARGSCAPVPH CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QTSQCAEPAEMLPLLSQ CCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA