| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 150398375
GI number: 150398375
Start: 3348875
End: 3349696
Strand: Direct
Name: mltB [H]
Synonym: Smed_3183
Alternate gene names: 150398375
Gene position: 3348875-3349696 (Clockwise)
Preceding gene: 150398374
Following gene: 150398376
Centisome position: 88.55
GC content: 64.6
Gene sequence:
>822_bases ATGCACAAGGTGAAGATCGCAGCAGCCGGCCTTGCGGCCCTTATCTCAATCGCAGTTCTCCCGGGATCCGCCAGCGCGGC TCAGTGCGGCAATGACGGGAGCGGTTTCTCGGCCTGGCTGTCGGAGTTTAAGCGCGAAGCCGCAGGGAACGGCATCAATC CTTCCGTTGTCGAGCAGGCGCTCGCCAACGTCTCCTACAGCAGAGCAACGATTCGCGCCGATCGCGGCCAGAAGAGCTTC AAGCTGTCGCTCGACCAGTTCATGCAGAAGCGCGGCGGCCAGGTCATCATTTCGCGTGGCAAGAAGTTGCGGGCGCAAAA TGCCCGGCTCTTCCAGAGCATCGAGCAGCGCTACGGCGTCCCCGCCGGCCCGTTGATCGCCATCTGGGGCATGGAGACCG GCTTCGGCTCGTTCTTGGGCAAGGAGCACACGCTCTCGGCCGTCTCGACGCTCGCCTATGACTGCCGCCGTTCGGATTAT TTCACCAACCAGCTTTACGCCGCCCTCCAGCTCGTCGAGCGCGGCGATCTCAGCCCGGCGGCCCGCGGGGCGGCCCACGG CGAAATCGGCCAGACCCAATTTCTCCCGGTGAACGTTCTGAAATACGGCGTGGACGGCGACGGCAACGGCCATGTCGACA TGGTCCGCTCCAAGGCGGACGCGCTTGCCTCGACTGCAAATTTCCTGCGCGGACACGGCTGGCAGCCGGGCGGCGGCTAT CAGCCGGGCCAGGTCAACTTCGCCGCCATTCAGGGCTGGAACGCTGCCAGCGTCTACCAGCAGGCGATCGCCATCATCGG CGCCGCAATAGATGGTGGCTGA
Upstream 100 bases:
>100_bases GGTTTCGCAGTTCTTTCGGCAGGCGACGGATTCACGTGAAACCTCAGCCGGCAGCGGATATTTCGAAGGCATCACATTCG GGCAATCGACGGGGTATTTT
Downstream 100 bases:
>100_bases AAACGAAGCTAGAAAGGGTGGGCGGTTTTCCACCCGCGGCCCGCTCTCGCTAGACTAGAGTCGGTCAGCCTTAAGCTGAA TCGCCTGGGGATTCCCTTTT
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MHKVKIAAAGLAALISIAVLPGSASAAQCGNDGSGFSAWLSEFKREAAGNGINPSVVEQALANVSYSRATIRADRGQKSF KLSLDQFMQKRGGQVIISRGKKLRAQNARLFQSIEQRYGVPAGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDY FTNQLYAALQLVERGDLSPAARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY QPGQVNFAAIQGWNAASVYQQAIAIIGAAIDGG
Sequences:
>Translated_273_residues MHKVKIAAAGLAALISIAVLPGSASAAQCGNDGSGFSAWLSEFKREAAGNGINPSVVEQALANVSYSRATIRADRGQKSF KLSLDQFMQKRGGQVIISRGKKLRAQNARLFQSIEQRYGVPAGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDY FTNQLYAALQLVERGDLSPAARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY QPGQVNFAAIQGWNAASVYQQAIAIIGAAIDGG >Mature_273_residues MHKVKIAAAGLAALISIAVLPGSASAAQCGNDGSGFSAWLSEFKREAAGNGINPSVVEQALANVSYSRATIRADRGQKSF KLSLDQFMQKRGGQVIISRGKKLRAQNARLFQSIEQRYGVPAGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDY FTNQLYAALQLVERGDLSPAARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY QPGQVNFAAIQGWNAASVYQQAIAIIGAAIDGG
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=124, Percent_Identity=35.4838709677419, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 28772; Mature: 28772
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKVKIAAAGLAALISIAVLPGSASAAQCGNDGSGFSAWLSEFKREAAGNGINPSVVEQA CCEEEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LANVSYSRATIRADRGQKSFKLSLDQFMQKRGGQVIISRGKKLRAQNARLFQSIEQRYGV HHHCHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCC PAGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDYFTNQLYAALQLVERGDLSPA CCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY HCCCCCCCCCCCEEEEHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QPGQVNFAAIQGWNAASVYQQAIAIIGAAIDGG CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHKVKIAAAGLAALISIAVLPGSASAAQCGNDGSGFSAWLSEFKREAAGNGINPSVVEQA CCEEEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LANVSYSRATIRADRGQKSFKLSLDQFMQKRGGQVIISRGKKLRAQNARLFQSIEQRYGV HHHCHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCC PAGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDYFTNQLYAALQLVERGDLSPA CCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY HCCCCCCCCCCCEEEEHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QPGQVNFAAIQGWNAASVYQQAIAIIGAAIDGG CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]